Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0642 ATGGTCAAGTTTTCTAAGCAATTTGAAGGGCAACTCATTCCAGAATGGAAAGAAGCCTTTGTGGATTATTGGCAGCTCAAGAAAGGCATCAAAAAAATCCAAATCTTTAATAATACCAACAATACACCAAACATGCACCAAACTAGTTCTATGCCTAAGTCCATCATTTCATCAATAAGAAATTACTCTCTATTTGGAAATCAACATAGAGAGCATGGACCAATACAAGTCCATAGGAAACTTGCTTCATCAACTAGTAAGGGGGACATGTATGAAACAGAACTGCTAGAGCAATTTGCTGATTCTGATGCTGCTAAAGAGTTTTTTGCATGTCTAGACCATCAACTAAACAAGGTCAATAAGTTTTACAGAACAAAGGAGGAAGAGTTTATGGAGAGAGGGGATTCATTGAGAAAACAAATGAAAATATTGGTTGAGCTTAAATCAACATTTTTGGAGAAGCAAGGCAAAGGAGGGTGCTCCCAAGAATCCAAGGAGGACCAATCTATCTCATGCACATTCTCTAATGAGGAAGACTCTGTTAGAAACAGAGAACTGCAAGAAGAAATGCAGGAAACTAGCACAGATGATAAAAATGAAACACCATTTTCAGACTCCCCTTGTACCGGTGAGGTTGGTAAATCGATGCAGATGAAAAGTGAAGATGGAAAACTGAGGACACACTCTGGCCGCATCAACAATTACCAAGGAAAGAATCTAAGGATAAACATTCCTCTGACAACACCATCTCGAACCTTCTCTGCCATAAGTTACCTTGTCCGCGAAGATTTGCTTAACCAGTCTTCAAGGAAATGTGGTACAGAAGGTGGAAAGATTCATGTTAACAAAACCAAGTTGCATCATGCTGAGAAAATGATCAAAGGAGGTTTCATTGAACTCTACAAAGGACTAGGATATCTCAAAGTTTATAGGAACTTGAATATGCTTGCATTTTTAAAGATTCTGAAGAAGTTTGACAAGGTCACTGCAAAACAAATTCTTCCCATCTATCTCAAAGTAGTTGAGAGTTCCTATTTCAATAGCTCAGATAAGGTGATGAAGTTAGCAGATGAAGTTGAGGAACTATTTGTCAAAAAGTTTGCTGAAGATAATAGAAGGAAGGCCATGAAGTACCTTAGACCAAGTCAGGCTAAAGAATCACATTTTGTAACTTTCTTCATTGGACTATTTACTGGATGCTTATTGGCGCTTTTAGCCGGATATGTTATAATGGCTCATGTAACTGGTCTGTACAGACCAAAGCAACATTCAGTTTACATGGAAACCGTGTACCCTGTGCTTAGCATGTTCAGTCTTATGTTTCTACATTTCTTTCTTTATGGCTGCAACATTCTTGCATGGAGAAAAACTCGAATAAACTACAGCTTCATTTTTGAGCTCGCCCCAACGAAAGACCTAAAGTATGGAGATATATTCTTAGTTTGTACTATGGCAATGACTACTGTGATTGGGGTAATATCTCTTCATCTGACTCTACTGACTAAGGGGTATTCTTATGCCCAAGTTCAAAACATTCCTGGACTACTTCTACTGGTCTTCTTACTAATGCTGGTGTGCCCCTTCAACATAATATACCGGTCAAGCCGTTATCGTTTTCTTTGTGTGATAAGGAACATAACTCTGTCACCCCTTTATAAGGTGGTCATGCTAGACTTTTTCATGGCTGATCAACTTTGTAGCCAGGTACCAATGATCAGGAACCTAGAGTATGTGGCATGTTACTATATAACTGGAAGCTACAAAACTCAGGACTATGGTTATTGCATGAGAACAAAGCACTATAGAGATCTTGCTTATGCAGTGTCTTTTCTACCCTACTATTGGAGGGCTATGCAGTGTGCTAGAAGATGGTTTGAAGAAGGGCAAAGAAGCCACCTTGTGAATCTTGGGAAATATGTATCAGCAATGCTAGCAGCAGGTGCTAAAGTGGCTTATGAGAAAGATGAGAGTATTGTATGGCTATGTCTTGTTGTGATCATGTCAAGTGCGGCAACTATGTACCAATTGTATTGGGACTTTGTAAAAGATTGGGGTCTGCTTCAAATCAATTCTAACAATCCATGGCTAAGGAATGAATTGATGCTACAAAGAAAATCCATTTACTACTTTTCCATGGTACATACAAATTACCACTCTAAAACTATCACTTATCAGAATCAGACAACTAAATATCATAGTCTAACACCTTTGCTATTAGGTGTTCATGATAAAATTTCCAAAGTGGAGAATAAATATATTCTCAAAAGAAATGCTGATAAGGCCATTATACAAACTAAAGGGTTGAATCTTATTCTGAGGCTTGCTTGGTTGCAAACTGTCCTTCATTCAAGTTTCGAAAGCGTTGATTATCGAGTAACAAGCTTATTTTTAGCAGCTCTTGAAGTTATAAGAAGAGGGCTATGGAATTTCTATAGATTGGAGAATGAGCATCTAAATAATGCTGGAAAGTTTAGAGCAGTGAAGACAGTACCACTTCCTTTTCATGAAGTGGATGAGGAAGACTTATAA 2529 0.3804 MVKFSKQFEGQLIPEWKEAFVDYWQLKKGIKKIQIFNNTNNTPNMHQTSSMPKSIISSIRNYSLFGNQHREHGPIQVHRKLASSTSKGDMYETELLEQFADSDAAKEFFACLDHQLNKVNKFYRTKEEEFMERGDSLRKQMKILVELKSTFLEKQGKGGCSQESKEDQSISCTFSNEEDSVRNRELQEEMQETSTDDKNETPFSDSPCTGEVGKSMQMKSEDGKLRTHSGRINNYQGKNLRINIPLTTPSRTFSAISYLVREDLLNQSSRKCGTEGGKIHVNKTKLHHAEKMIKGGFIELYKGLGYLKVYRNLNMLAFLKILKKFDKVTAKQILPIYLKVVESSYFNSSDKVMKLADEVEELFVKKFAEDNRRKAMKYLRPSQAKESHFVTFFIGLFTGCLLALLAGYVIMAHVTGLYRPKQHSVYMETVYPVLSMFSLMFLHFFLYGCNILAWRKTRINYSFIFELAPTKDLKYGDIFLVCTMAMTTVIGVISLHLTLLTKGYSYAQVQNIPGLLLLVFLLMLVCPFNIIYRSSRYRFLCVIRNITLSPLYKVVMLDFFMADQLCSQVPMIRNLEYVACYYITGSYKTQDYGYCMRTKHYRDLAYAVSFLPYYWRAMQCARRWFEEGQRSHLVNLGKYVSAMLAAGAKVAYEKDESIVWLCLVVIMSSAATMYQLYWDFVKDWGLLQINSNNPWLRNELMLQRKSIYYFSMVHTNYHSKTITYQNQTTKYHSLTPLLLGVHDKISKVENKYILKRNADKAIIQTKGLNLILRLAWLQTVLHSSFESVDYRVTSLFLAALEVIRRGLWNFYRLENEHLNNAGKFRAVKTVPLPFHEVDEEDL 842
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0642 842 CDD SPX_PHO1_like 3 335 IPR034092 -
Lal22g0642 842 ProSiteProfiles EXS domain profile. 596 842 IPR004342 GO:0016021
Lal22g0642 842 Coils Coil 176 196 - -
Lal22g0642 842 MobiDBLite consensus disorder prediction 178 199 - -
Lal22g0642 842 Pfam SPX domain 2 341 IPR004331 -
Lal22g0642 842 MobiDBLite consensus disorder prediction 162 177 - -
Lal22g0642 842 PANTHER PHOSPHATE TRANSPORTER PHO1 HOMOLOG 1 738 841 - -
Lal22g0642 842 PANTHER PHOSPHATE TRANSPORTER PHO1 HOMOLOG 1 2 713 - -
Lal22g0642 842 PANTHER XENOTROPIC AND POLYTROPIC RETROVIRUS RECEPTOR 1-RELATED 2 713 - -
Lal22g0642 842 PANTHER XENOTROPIC AND POLYTROPIC RETROVIRUS RECEPTOR 1-RELATED 738 841 - -
Lal22g0642 842 MobiDBLite consensus disorder prediction 155 231 - -
Lal22g0642 842 Pfam EXS family 767 818 IPR004342 GO:0016021
Lal22g0642 842 Pfam EXS family 431 713 IPR004342 GO:0016021
Lal22g0642 842 ProSiteProfiles SPX domain profile. 2 339 IPR004331 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0642 Lal-Chr22 4548321 4553696 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g0642 22 4548321 4553696 Lal22g0642 22 4548321 4553696 ECH
Lal22g0642 22 4548321 4553696 Lal6g0718 6 4760995 4769426 LSH