Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0638 ATGTTGCCACTCACTGTGCGATCTCTTGGAACAGAAGGAAGAAAAAAGGATGGTCAACAAATTCCTCCAGGTGGCAAGGTTTATGAGTATATACTTTTCCGCAGATCTGAAATCAAGGATTTACAGGTTAAATCCTCACCACATGTTCAGCCTACTCCTCAATTCAACAATGACCCAGCTACTATTCAGTCTCACTATCCTCACCCAGTCACAGCATCTACAAGTTTGCCTTCCATGGTGAGTGCATCTTTGGCTGATCATAATTCTCATGCCACCCACCTTGGAAACCTCGGCTCGAACTTTCAAGGCCCCTCACCTTTATATCAACCTGAGGGGAACATAGAGTCATGGGGAACTTCTCCATCTGCCCCAAATGCAAATGGTGGTGGACTAACTATGGCGATTGATTTGCAAGGATATTATGCTGCTCCAAATGGGATTCCTCATTTACATCATCAACCTTTGCTTCCACCACCACTTGGTTGTTCAATTCCTCCATCTTTTCAGCAGCCAATGCAGTATTCGGATTTTAGTCCCTCTTTACTGACTGGATTTTCTAATTTGCCTGAATTACCGTCATCATTGCTACCTGTGAGTTCTAGTACACCTAGTCTTACATCTGCTTCCTTACCATTATCAAATTTGTCTCCAGAATCTTCTGCTTTTCCCCAGGATCCTTCTACTTCAAGTCATGCACCTCCTGCAAAACTAGCTTCTGAAACTTTACCAGTATCATTGACTAACAAGGCACCAAATCTTTCACTTCCAGCAGTGCCACTAGCTGCTAACTTCCCGTCACCTTCTGCTTTGACCAATTCTGGTTCAGATATAAATGCTATAGTGCGGCCACTCTCCATCAAGCCTAATGCACTTTATTGTTCAAGCTCGACATATGAAACTGTACCCCAGTTGTGTCTTGCAATTGCTGGATCATCAAATTCTATCTCTACAGAAACACGAGCCCCTTCTCCGGTAACCCCAGGTCAACTATTGCAGCCTGTACCAGCTGTAGTTTCTTCAGATCAACATTTGCAAACACCTCATAAGGATGTTGAAGTTGTTCAAGTATCATCAAGATCATCTCCTGAGCCATCTTTGCCAGTCTTTGCTGAAAATCAACTACCAATACTGCCATTAGCAGTAACTTCATGGCCTTGTCATATGTATTTTAGGCCGGGTGGAGTTCCTATCCAAACTCATCATGGCTACAGTGCATATCGAAGAGGAACTGGGGTTTGGCACCCAGACCCCAAGTTCATGGCAAAGAAGGAAAAATTCAAAAAGGATGAAGTACCAGGTCATCTTGGTAAAAACCATATGTCTCATTCAAAAGAGAAAGATGAGGAAGAAAACGCTTTTATTGAAGATGGGGATGCTTTCTTTGATTCACTCTCTTCGGATGCGCTTGATCAGGCTTCACAGAATGGGAGGACTGAATATTCTGAACAAATTAAGAATGATACTGAGACAATTGGTGACTTGGTGAGCCATCCTGGTGGTAGAGGGGGCCGTAGTCCTTTCCATGGTGGTAGAGGGGGCCGTGATCCTTCCAATGGTGGTAGAGGCGGAAGTGATCCTTCCAATGGTGGTAGAGGGGGCCGTGGTCCTTCCAATGGTGGTAGAGGGGGCAGTGATCCTTCCAATGGTGGTAGAGGGGGCCGTGGTCCTTCCAATGGTGGTAGAGGGGGCCGTGGTCCTTCCGATGGTGGTAGAGGGGGCCGTGATCCTTCCAATGGTGGTAGAGGTGGCCGTGGTCCTTCCAATGGTGGTAGAGGTGGCCGTGGTCCTTCTGGTGGTGGTAGAGGTGGCCGTGGTCCTTCCGATGGTGGTAAAGGTGGTCGTGGTCCTTCTGATGGTGGTGAAGGTGGCCGTGGTCCTTCCGGTGGTGGTTCTTCCGATGGTGGTAGAGGGGGCCATGGTCCTTCCAATGGTGGTGGTAAAGGGGGCCGTGGTCCTTCCAATGGTGGTGGTAAAGGGGGCCGTGGTCCTTCCAATGGTGGTAGAGGGGGCCATGGTCCTTCCACTGATGGTAGAGGGGCCCCTCCTTCCCGTGGTGGTAGAGGGGGTCGTGGTCCTTCCCGTGGTGGTAGAGGGGGTCATGGTCCTTCCCATGGTGGTAGAGGGAGCAATGGTGCTTTCGGCGGTAGCAGCATGCCCAGTCACAGTTCTTAG 2172 0.4862 MLPLTVRSLGTEGRKKDGQQIPPGGKVYEYILFRRSEIKDLQVKSSPHVQPTPQFNNDPATIQSHYPHPVTASTSLPSMVSASLADHNSHATHLGNLGSNFQGPSPLYQPEGNIESWGTSPSAPNANGGGLTMAIDLQGYYAAPNGIPHLHHQPLLPPPLGCSIPPSFQQPMQYSDFSPSLLTGFSNLPELPSSLLPVSSSTPSLTSASLPLSNLSPESSAFPQDPSTSSHAPPAKLASETLPVSLTNKAPNLSLPAVPLAANFPSPSALTNSGSDINAIVRPLSIKPNALYCSSSTYETVPQLCLAIAGSSNSISTETRAPSPVTPGQLLQPVPAVVSSDQHLQTPHKDVEVVQVSSRSSPEPSLPVFAENQLPILPLAVTSWPCHMYFRPGGVPIQTHHGYSAYRRGTGVWHPDPKFMAKKEKFKKDEVPGHLGKNHMSHSKEKDEEENAFIEDGDAFFDSLSSDALDQASQNGRTEYSEQIKNDTETIGDLVSHPGGRGGRSPFHGGRGGRDPSNGGRGGSDPSNGGRGGRGPSNGGRGGSDPSNGGRGGRGPSNGGRGGRGPSDGGRGGRDPSNGGRGGRGPSNGGRGGRGPSGGGRGGRGPSDGGKGGRGPSDGGEGGRGPSGGGSSDGGRGGHGPSNGGGKGGRGPSNGGGKGGRGPSNGGRGGHGPSTDGRGAPPSRGGRGGRGPSRGGRGGHGPSHGGRGSNGAFGGSSMPSHSS 723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0638 723 MobiDBLite consensus disorder prediction 427 450 - -
Lal22g0638 723 SUPERFAMILY Sm-like ribonucleoproteins 6 49 IPR010920 -
Lal22g0638 723 Pfam Scd6-like Sm domain 6 45 IPR025609 -
Lal22g0638 723 MobiDBLite consensus disorder prediction 207 235 - -
Lal22g0638 723 PANTHER LSM DOMAIN, FDF DOMAIN, FFD BOX, DFDF DOMAIN, TFG BOX-RELATED 5 538 - -
Lal22g0638 723 MobiDBLite consensus disorder prediction 1 22 - -
Lal22g0638 723 MobiDBLite consensus disorder prediction 470 490 - -
Lal22g0638 723 SMART LSM14_2 1 66 IPR025609 -
Lal22g0638 723 Gene3D - 4 50 - -
Lal22g0638 723 PRINTS Eggshell protein signature 538 549 - -
Lal22g0638 723 PRINTS Eggshell protein signature 627 642 - -
Lal22g0638 723 PRINTS Eggshell protein signature 656 666 - -
Lal22g0638 723 PRINTS Eggshell protein signature 704 722 - -
Lal22g0638 723 MobiDBLite consensus disorder prediction 470 723 - -
Lal22g0638 723 PANTHER SCD6 PROTEIN-RELATED 5 538 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0638 Lal-Chr22 4509225 4516067 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g0638 22 4509225 4516067 Lal22g0638 22 4509225 4516067 ECH