Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0631 ATGGAGTTGTTGCACCACCATAAGATGGAGTTGTGTGACTACATCGAAGCGTTAGAAGAAGAAAGAAGAAAAATTCAGGTCTTCAACAAAGAACTTCCTTTGTCCTTGGAGCTTGTCACGCAAGCCATTATAGCGTGTAAGCAGCAGTTATCTGGAACGATGACAGAGTATAATTTGAATGGTCAATTGGAGTGTTCTGAGCAGACCTCAACGGAGGAAGGACCTGTTTTTGAGGAGTTCATGCCTATAAAGAAAAGATCTTCTCCTGATTATGATGATGATGATGATGGAGATGATAATGATGAACAACATTCTCACAAGCACAAGATTCTAAAGGATAGCACTAAATCAGATTGGCTCAGATCTGTTCAGTTGTGGAATCCTGATCCCCCTTCTACAAATGAGGATGTGCCTAGAAAAGCATCAATGGTAGTAGTGAAGAGGAATGGTGGTGGTGCTTTTCAGCCATTTCATAAAGAGGAAAGTACTATTGGAAAGGCCAATAATGCATCATCAAATGATAAAGCATCCACTTCTCCACAAGTACCAGCAACAAGTTCAACAGGACCAGTTACAGGAGACAATGTTGATGGAATTAGCAAAATTGAGGATAAAGGGCAGAAAAAGAAGCGAAGGTCCTGGTCACAAGATTTGCATAAACGCTTTTTGCATGCTCTTCAAGAACTTGGAGGTGCAGATTTTGCCACACCGAAACAGATCAGAGATCTAATGAAGGTTGATGGCCTCACCAATGATGAAGTCAAAAGTCATTTACAGAAATTTCGTCTGCACAACCGAAGACCAAACTCGATTATTCACAACAATGCTAATTCAAAAGCAGCTCCCTTGTTTCTTGTGGGGAACATTTTTGTTCAACCACCAGAATATGCTGCAGTAGCTACCTCATCAGGGGAATTGACCACAGATACTGCACCTACTGCAATTTATGCACCTGTGGCTACACATCCTCCAGCTTCTACACACACATCAGAAGGAAGGGCTAATCATAGTGAAGGAGCTGGTAATTCAAACTCTCCTGTCTCATCATCCTCTACACATATCACAACATCTTCACCTGGCTTTTAA 1086 0.4153 MELLHHHKMELCDYIEALEEERRKIQVFNKELPLSLELVTQAIIACKQQLSGTMTEYNLNGQLECSEQTSTEEGPVFEEFMPIKKRSSPDYDDDDDGDDNDEQHSHKHKILKDSTKSDWLRSVQLWNPDPPSTNEDVPRKASMVVVKRNGGGAFQPFHKEESTIGKANNASSNDKASTSPQVPATSSTGPVTGDNVDGISKIEDKGQKKKRRSWSQDLHKRFLHALQELGGADFATPKQIRDLMKVDGLTNDEVKSHLQKFRLHNRRPNSIIHNNANSKAAPLFLVGNIFVQPPEYAAVATSSGELTTDTAPTAIYAPVATHPPASTHTSEGRANHSEGAGNSNSPVSSSSTHITTSSPGF 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0631 361 MobiDBLite consensus disorder prediction 320 361 - -
Lal22g0631 361 MobiDBLite consensus disorder prediction 323 361 - -
Lal22g0631 361 MobiDBLite consensus disorder prediction 162 194 - -
Lal22g0631 361 Gene3D - 208 266 - -
Lal22g0631 361 MobiDBLite consensus disorder prediction 81 113 - -
Lal22g0631 361 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 3 329 IPR044787 GO:0003700|GO:0006355
Lal22g0631 361 SUPERFAMILY Homeodomain-like 207 266 IPR009057 -
Lal22g0631 361 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 3 329 - -
Lal22g0631 361 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 209 264 IPR006447 GO:0003677
Lal22g0631 361 MobiDBLite consensus disorder prediction 151 215 - -
Lal22g0631 361 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 206 266 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0631 Lal-Chr22 4431705 4434139 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal22g0631 1 321 G2-like Transcription Factor Family AT1G68670 46.608 5.78e-74 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lal22g0631 None None None
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g0631 22 4431705 4434139 Lal22g0631 22 4431705 4434139 ECH
Lal22g0631 22 4431705 4434139 Lal6g0702 6 4615508 4617770 LSH