Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0628 ATGAAGAGTGCGATTTGTGGAAGAATTGGTCTCTCTCCTAACCATATCTTTAACCCTAACTCAGGGGACAGATATTCTCTTTGTAGAGGGCCATGCTCCAATCTTGTCATTCCGATGGCTTTAGTATCGACAGGACCTGGTAAAGGAGGAGGATTGCTGGAAAAGCCAGTTATTGAAAAAGTCACCCCTGGTCGTGAATCTGAATTTGATTTGAAGAAATCGAGGAAAACAGCACCACCATATCGAGTAATGCTGCACAATGACGACTACAATAAACGAGAATATGTTGTACAAGTACTGATGAAGGTTATCCCTGGCATGACAGTTGATAATGCAGTTAACATCATGCAAGAAGCACACTATAATGGATTATCAGTGGTGATCATTTGTGCCCAAGCTGATGCTGAAGATCATTGCATGCAACTTAGAGGCAATGGGTTACTCAGTTCAATTGAACCTGCAAGTGGAGGTTGCTGA 477 0.4235 MKSAICGRIGLSPNHIFNPNSGDRYSLCRGPCSNLVIPMALVSTGPGKGGGLLEKPVIEKVTPGRESEFDLKKSRKTAPPYRVMLHNDDYNKREYVVQVLMKVIPGMTVDNAVNIMQEAHYNGLSVVIICAQADAEDHCMQLRGNGLLSSIEPASGGC 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0628 158 Hamap ATP-dependent Clp protease adapter protein ClpS [clpS]. 66 155 IPR022935 GO:0006508
Lal22g0628 158 PANTHER BNAA07G24510D PROTEIN 1 158 - -
Lal22g0628 158 Gene3D - 58 155 IPR014719 -
Lal22g0628 158 Pfam ATP-dependent Clp protease adaptor protein ClpS 77 144 IPR003769 GO:0030163
Lal22g0628 158 PANTHER ATP-DEPENDENT CLP PROTEASE ADAPTER PROTEIN CLPS1, CHLOROPLASTIC 1 158 IPR022935 GO:0006508
Lal22g0628 158 SUPERFAMILY ClpS-like 75 153 IPR014719 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0628 Lal-Chr22 4406295 4409917 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g0628 22 4406295 4409917 Lal22g0628 22 4406295 4409917 ECH
Lal22g0628 22 4406295 4409917 Lal6g0698 6 4584705 4588259 LSH