Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0623 ATGTCTATGTCTGATGAAACACTATATCCAATTGCTGTGCTTATAGACGAGCTGAAAAATGATGATATCCAGCTACGTCTGAACTCGATTCGCAAGCTATCGACAATTGCACGTGCTCTTGGGGAAGAAAGAACCAGGAGGGAATTAATTCCATTTTTGAGTGAGAATAATGATGAGGATGATGAGGTACTTCTTGCAATGGCGGAAGAGTTGGGAGTATTCATTCCTCATGTTGGGGGTGTGGATCATGCCCATGTGTTGCTCCCACCTTTGGAGACATTTTGCACTGTTGAGGAAACCTCCGTGAGAGATAAAGCCGTGGAATCACTTTGTAAAATTGGATCTCAAATGAGGGAGAGTGATTTGGTTGAGTATTTCATCCCTTTAGTGAAGAGGTTGGCTGCTGGTGAATGGTTTACTGCCCGAGTCTCTGCATGTGGCCTATTTCATATTCCATACCAAAGTGCACCAGAAATTTTGAGGACAGAGTTGAGGTCAATATACAGTCAGTTGTGTCAAGATGACATGCCAATGGTTAGAAGGTCTGCTTCGTCAAATATTGGGAAGATTGCTGAAGCTGTTGAATATGCTCATTTGAAGGCTGACATCATGCCAATTTTTGAGGATCTTACTAAGGATGATCAAGATTCTGTTAGATTGTTGGCTGTGGAGAGTTGTGCTGCTATTGGCAAGCTGTTGCAGCCACAAGACTGTGTTGCACATATACTTCCACTTATTGTTAACTTCTCTCAGGATAAGTCTTGGCGTGTGCGTTACATGGTTGCAAATCAATTGTATGAGCTCTGCGAAGCTGTAGGCCCTGAATCTACCAGAACTGAATTGGTCCCTGCTTATGTACGGTTGCTTCGAGACAATGAAGCGGAAGTAAGAATTGCGGCTGCTGGGAAGGTGACCAAGTTTTGCCTGATCTTAAATCCAGATCTTGCAATACAGCATATTCTTCCTTGTGTGAAAGAATTGTCATTGGATTCTTCACAGCATGTTCGCTCTGCTTTGGCTTCAGTGATAATGGGAATGGCTCCAGTTTTAGGAAAGGATGCAACAATTGAGCAACTTCTTCCTATTTTTCTATCTCTTTTGAAGGATGAATTTCCTGATGTGCGCCTAAATATCATAAGCAAGCTTGATCAAGTGAATCAGGTTATTGGAATCGATTTGTTATCTCAATCTTTGTTACCAGCCATTGTTGAGCTTGCTGAGGATAGGCATTGGAGGGTTCGGCTTGCAATAATAGACTATATACCCTTGTTGGCAAGTCAATTAGGGGTTGGATTTTTCGATGACAAGCTTGGTGCTCTTTGCATGCAGTGGTTACAGGACAAGGTTCATTCAGTCCGAGAGGCAGCTGCTAACAACTTGAAGCGCCTTGCAGAAGAATTTGGTCCCGAGTGGGCTGTGGACCATATAATTCCTCAGGTTTTGGAAATGATTAATAACCCTCACTATTTGTATCGGATGGCCGTTCTTAATGCTATCTCGCTGCTTGCCCCTGTAATGGGCTCTGAAATCACTTGTTCAAAATTGTTGCCTGTCGTTGTTGCTACATCAAAAGACAGAGTGCCCAACATTAAATTCAATGTGGCAAAGGTTTTAGCGTCCATCTTCCACCTAGTTGATCATCCTGTTGTGGAAAATACAATCCGTCCGTGTCTGGTTGAACTGAGTGAGGATCCTGATGTTGATGTAAGATATTTTTCCAATCAAGCACTTCAGGCTATTGATAATGTCATGATGTCTGTAGACAGGACTCTCTAA 1776 0.4268 MSMSDETLYPIAVLIDELKNDDIQLRLNSIRKLSTIARALGEERTRRELIPFLSENNDEDDEVLLAMAEELGVFIPHVGGVDHAHVLLPPLETFCTVEETSVRDKAVESLCKIGSQMRESDLVEYFIPLVKRLAAGEWFTARVSACGLFHIPYQSAPEILRTELRSIYSQLCQDDMPMVRRSASSNIGKIAEAVEYAHLKADIMPIFEDLTKDDQDSVRLLAVESCAAIGKLLQPQDCVAHILPLIVNFSQDKSWRVRYMVANQLYELCEAVGPESTRTELVPAYVRLLRDNEAEVRIAAAGKVTKFCLILNPDLAIQHILPCVKELSLDSSQHVRSALASVIMGMAPVLGKDATIEQLLPIFLSLLKDEFPDVRLNIISKLDQVNQVIGIDLLSQSLLPAIVELAEDRHWRVRLAIIDYIPLLASQLGVGFFDDKLGALCMQWLQDKVHSVREAAANNLKRLAEEFGPEWAVDHIIPQVLEMINNPHYLYRMAVLNAISLLAPVMGSEITCSKLLPVVVATSKDRVPNIKFNVAKVLASIFHLVDHPVVENTIRPCLVELSEDPDVDVRYFSNQALQAIDNVMMSVDRTL 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0623 591 ProSiteProfiles HEAT repeat profile. 87 125 IPR021133 -
Lal22g0623 591 Pfam HEAT repeat 242 270 IPR000357 GO:0005515
Lal22g0623 591 ProSiteProfiles HEAT repeat profile. 515 553 IPR021133 -
Lal22g0623 591 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A 65 KDA REGULATORY SUBUNIT 1 586 - -
Lal22g0623 591 Gene3D - 2 583 IPR011989 -
Lal22g0623 591 ProSiteProfiles HEAT repeat profile. 164 202 IPR021133 -
Lal22g0623 591 ProSiteProfiles HEAT repeat profile. 398 436 IPR021133 -
Lal22g0623 591 Pfam HEAT repeats 361 461 - -
Lal22g0623 591 ProSiteProfiles HEAT repeat profile. 10 48 IPR021133 -
Lal22g0623 591 ProSiteProfiles HEAT repeat profile. 476 514 IPR021133 -
Lal22g0623 591 ProSiteProfiles HEAT repeat profile. 437 475 IPR021133 -
Lal22g0623 591 ProSiteProfiles HEAT repeat profile. 281 319 IPR021133 -
Lal22g0623 591 ProSiteProfiles HEAT repeat profile. 242 280 IPR021133 -
Lal22g0623 591 PANTHER PROTEIN PHOSPHATASE 2A REGULATORY SUBUNIT A, PUTATIVE-RELATED 1 586 - -
Lal22g0623 591 ProSiteProfiles HEAT repeat profile. 320 358 IPR021133 -
Lal22g0623 591 SUPERFAMILY ARM repeat 6 580 IPR016024 -
Lal22g0623 591 ProSiteProfiles HEAT repeat profile. 203 241 IPR021133 -
Lal22g0623 591 ProSiteProfiles HEAT repeat profile. 554 586 IPR021133 -
Lal22g0623 591 ProSiteProfiles HEAT repeat profile. 359 397 IPR021133 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0623 Lal-Chr22 4373471 4383813 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g0623 22 4373471 4383813 Lal22g0623 22 4373471 4383813 ECH
Lal22g0623 22 4373471 4383813 Lal6g0694 6 4566613 4572069 LSH