Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0621 ATGGCCACCGATGGCCACAAGCACCGCCGTTCCATCTCCCCTGGGGACGCCGATAAATCCTCTAAGCGCCACAAGCACCGCCACCATCATCGCCGCCACCACCGCCACGGAAGCAGAAAGCGCGACGAAGAAAACGAATATGATTGTGAAACTGTTCCTGCGGTTCCTTCACCGGTTCCCGCTAGCAATTCTGCTCCAAATTGTCATGTGGCCGTTGATGATGTCGAGGACGGGGAGATTTTCGAAGTTGAAGATGGCGATGTTGGGAAAAAACAGATTGCATCTGATTCCGAGGTTGGTGGAATTGACGTGATCGGAAATCGAGATGCTCGATCTGATAAGGCAAATTCGGGGCTTCACGCTAACAATTCGAAAGTTAGAAGTGAGGCTAGTAGTGATGAAATTTGTTTTAGCCTGGCGTTTGATGCAGAAGATAGGTCATGCCGTCAGAATAACATTGGCCGTAGAATGCATGAAGATGAGGATTCTCCTAATCTTTTAAGTGCTAATCCTAAATATGTAAAGGATGCTATAGGTAGTACAAATATCATGGGAAATGGGCATTTGAATCCCAAGTCTCCTAAAAGAGAAAAGAGGCACAGTGGAGAAAGTGGATCTTATAAAGGAAACAAGATAGTAAAAGGTGAGTATGATGATGATCTGGAGGTTAATGGAGGGAAAGTAAATTATCACAGAAATTCATCCTCGAAAAGTGGAGAGAAATATAAGTCAGGAAATTTGCCTTCTCGTGATAGATATAGAAGTCGATCAAGATCAAACGATCATGCTAGGGACAGGTCTCGTTCTGATAGTGTAGTAGAAGAACATAAAAGGCACTTTGGTGAACAAGGGGACCATCCATATGCTGGTCCTGATCATGATCATGGTGGTGAAAGAATGGTGGTAAGGATAAGTGAGCATTATCGCAGTCGGGAGGCCCGAGATATGAGTATGGACAGGGATGTTGATAGGGACTTGCAGAGGGAAAAGAAACGAGAGAATAGCAGGAATAGGGAGGTAGACCGGGTCTGTAGAAGGGAAAAAGAACATGGAAGTAGCCACGTGAGGCATAGAAGGGATGCAGAAAGAGGTAAGAGTAGGGAAAAAGAGGATGATAGTGGTAGGAGAAGAGAAAAGGAACGAGATAGAAGCTGGGAGACAGTGTATGAAAGGGATAGGAAAGGGGAGAAGCAAAGAGATAGAAGCAGGGACAGAACAAGGGGTGATGAAAGAGATAGAGTCTGGGAGAGTCGGCAGAATGATAAGAATCTGGAAAGGGTTAAAAGTAAGGAGACAGAGAAGGAGAAGCAAGATGATAGAAATAGGCATAAGTATAAAGACGTTGTGAATGATAAGGGTGAGTATCTGCATCACGGGGACAGTTATGACAGTCGAGATAGATATAGAAGGCATTCAAGACATGAAGAAACAGAATGGCACCGGGAAAGAAAAAGAAATTCTGAGCCTGTTAAGGTTTATAACAGTATGGACAGTACCTTGGTTGATGATGAAAACAATCTCGACAGAGAAGAGGATGAAGATGACTTAGATGAGAATGTTACATTGCAATTACCTGATCAAGAAGAAGAAGATCTCAACAGGATTAAAGAGGAGAGTAGAAGGAGAAGGGAAGCAATCTTAGAAAAGTACAAGAAGCAGCAGCAGCAAGTAGAACAAACTACTGAAAGTGAAGGAAAAGACAAGCAAACTGAGGAGATACCTCCTGCCATTCCTAAAGCTCTTTATGGTAAGAACGATGATGTTGATGGTGCAGAAACATCTATTTCTGTTGGTAAATCTCATCCAAAAAATGGAAATGTTGCTTCTGATAAGATCTCAGTTGCTGGGGGACTTAGAGAGGGTACTCCTAAGAGTGAGAGATCAGATGACAAGTTTTGTGATGATATATTTGGCGAGACACCAACTGGAGTTCGGAAATTGGGAAAGGGAGATGGTTTACAGATTGAGAGGGGTGGCTTGCATGACAACTGGGATGATGCAGAGGGGTATTACAGTTATCGTTTTGGTGAAATACTTGATGGCCGATATGAAGTCATTGCTGCTCATGGAATGGGTGTCTTTTCAACAGTTATTCGAGCGAAGAATCTTAAGGATGGTAATGGAGAGCCCGAAGAAGTAGCTATCAAAATTATTCGTAGTAATGACACTATGTACAAGGCTGGTATGGATGAGTCAGTCATATTGAAGAAATTAGTAGGTGCTGATCCAGATGATAAGCGTCATTGTGTTCGTTTTCTTTCATGTTTTAAGTACAGGAATCATCTCTGTTTAGTTTTTGAATCTCTTCATATGAATCTGCGTGAGGTCTTAAAGAAGTTTGGTCGCAATATTGGACTTAAGCTAACTGCAGTGAGAACGTATGCAAAACAGCTTTTTATTGCACTGAAGCATCTTCGGAACTGTGGTGTTCTCCATTGTGATATAAAACCAGATAATATGTTGGTAGGCCTAAAATACTGTTTTGTGGTAAATGAGGCCAAAAATGTTTTGAAGCTGTGTGACTTCGGGAATGCCATGTTTGCTGGTAAAAATGAAGTTACCCCATATCTTGTTAGTCGCTTTTATCGTGCCCCAGAAATAATACTTGGCTTGACCTATGATCATCCATTGGATATGTGGTCTGTAGGTTGTTGCTTGTATGAACTCTATAGTGGGAAAGTTCTTTTTCCAGGCTCCACAAACAATGACATGCTACGGCTTCATATGGAATTGAAGGGCCCTTTTCCAAAGAAGATGCTACGTAAGGGAGCATTTACTGAACAACATTTTGATCTGGACTTGAATTTTTTTGCTACAGAGGAGGACCCTGTGACAAAAAAGATGATAAAACGGATGATTGTCAACATAAAGCCAAAAGATATTGGAACAGTCATCACTGGCTCTACTGGAGAGGATCCAAAAATGCTGGCCAACTTCAAGGATCTTCTGGAAAAAGTTTTTGTCTTGGATCCAGACAAGAGGTTGACTGTCTCAGAAGCATTGAATCACTCATTCATCTCTGGCAAGTGA 3030 0.4218 MATDGHKHRRSISPGDADKSSKRHKHRHHHRRHHRHGSRKRDEENEYDCETVPAVPSPVPASNSAPNCHVAVDDVEDGEIFEVEDGDVGKKQIASDSEVGGIDVIGNRDARSDKANSGLHANNSKVRSEASSDEICFSLAFDAEDRSCRQNNIGRRMHEDEDSPNLLSANPKYVKDAIGSTNIMGNGHLNPKSPKREKRHSGESGSYKGNKIVKGEYDDDLEVNGGKVNYHRNSSSKSGEKYKSGNLPSRDRYRSRSRSNDHARDRSRSDSVVEEHKRHFGEQGDHPYAGPDHDHGGERMVVRISEHYRSREARDMSMDRDVDRDLQREKKRENSRNREVDRVCRREKEHGSSHVRHRRDAERGKSREKEDDSGRRREKERDRSWETVYERDRKGEKQRDRSRDRTRGDERDRVWESRQNDKNLERVKSKETEKEKQDDRNRHKYKDVVNDKGEYLHHGDSYDSRDRYRRHSRHEETEWHRERKRNSEPVKVYNSMDSTLVDDENNLDREEDEDDLDENVTLQLPDQEEEDLNRIKEESRRRREAILEKYKKQQQQVEQTTESEGKDKQTEEIPPAIPKALYGKNDDVDGAETSISVGKSHPKNGNVASDKISVAGGLREGTPKSERSDDKFCDDIFGETPTGVRKLGKGDGLQIERGGLHDNWDDAEGYYSYRFGEILDGRYEVIAAHGMGVFSTVIRAKNLKDGNGEPEEVAIKIIRSNDTMYKAGMDESVILKKLVGADPDDKRHCVRFLSCFKYRNHLCLVFESLHMNLREVLKKFGRNIGLKLTAVRTYAKQLFIALKHLRNCGVLHCDIKPDNMLVGLKYCFVVNEAKNVLKLCDFGNAMFAGKNEVTPYLVSRFYRAPEIILGLTYDHPLDMWSVGCCLYELYSGKVLFPGSTNNDMLRLHMELKGPFPKKMLRKGAFTEQHFDLDLNFFATEEDPVTKKMIKRMIVNIKPKDIGTVITGSTGEDPKMLANFKDLLEKVFVLDPDKRLTVSEALNHSFISGK 1009
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0621 1009 MobiDBLite consensus disorder prediction 178 537 - -
Lal22g0621 1009 MobiDBLite consensus disorder prediction 1 67 - -
Lal22g0621 1009 Gene3D Transferase(Phosphotransferase) domain 1 743 1007 - -
Lal22g0621 1009 Coils Coil 536 563 - -
Lal22g0621 1009 SMART serkin_6 683 1006 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal22g0621 1009 MobiDBLite consensus disorder prediction 549 634 - -
Lal22g0621 1009 CDD STKc_PRP4 682 1006 IPR044092 GO:0004674|GO:0006468|GO:0045292
Lal22g0621 1009 PANTHER DUAL SPECIFICITY PROTEIN KINASE 365 1009 - -
Lal22g0621 1009 MobiDBLite consensus disorder prediction 234 490 - -
Lal22g0621 1009 Gene3D Phosphorylase Kinase; domain 1 654 742 - -
Lal22g0621 1009 ProSitePatterns Serine/Threonine protein kinases active-site signature. 810 822 IPR008271 GO:0004672|GO:0006468
Lal22g0621 1009 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 365 1009 - -
Lal22g0621 1009 MobiDBLite consensus disorder prediction 1 20 - -
Lal22g0621 1009 Pfam Protein kinase domain 684 1006 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal22g0621 1009 ProSiteProfiles Protein kinase domain profile. 683 1006 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal22g0621 1009 Coils Coil 493 513 - -
Lal22g0621 1009 MobiDBLite consensus disorder prediction 21 38 - -
Lal22g0621 1009 MobiDBLite consensus disorder prediction 212 226 - -
Lal22g0621 1009 MobiDBLite consensus disorder prediction 504 525 - -
Lal22g0621 1009 SUPERFAMILY Protein kinase-like (PK-like) 670 1007 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0621 Lal-Chr22 4358971 4368773 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal22g0621 690 1007 Core Cell Cycle Gene Families AT1G66750 28.571 2.75e-24 103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-PRP4 Lal22g0621 Pkinase 6.3e-43 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g0621 22 4358971 4368773 Lal22g0621 22 4358971 4368773 ECH