Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0612 ATGAATACTGCTTTTGCTAAAAACGTAGCAAACTCTGTTGGTAGCAAAACAGCAAGAGCTTGTGATAGCTGCATAACAAAGCGAGCACGTTGGTATTGTGCTTCTGATGATGCCTTTCTTTGCGAAGCTTGTGACTCTTCTATTCACTCAGCTAATCAATTAGCTCGTAAGCACCAACGAGTTCGTTTGAAAATCACTTCATGCAATTATGATGCTCCAACGTGGCACAAAGGTTTCACTAAGAAAGCTAGAACGCCAAGACAAAAGGCTAAGAACCCTTTCCATCTTGTACCTGAAGTTGGTCATTGGGATGATGCAAACTCCAATGAAGAGAGTGAGGAGAAGCTACTTTATAGGGTTCCTATGTTGGACCCCCTTGCTGCTGAATTATGCACAACCCCAAGTTCTATGGCTGTGGTTGAAGCTCTTGAGGTTGAAACCAGTGGCACCAAAGGTGAAGAGGGCAAAGATTCTTTGGGTTATAAGAATTATGGTGTGGAGAGTTTAAATGGGTTTCTTTCATTGGATACTGAACTTGAGGAGTTTGCTGCTGATGTTGAAAGTTTATTGGGAAAGGGACTTGAGAATGAGTGCAATATAGGAATGGAAGAGTTGATTCATAGAAAAGAAAATTTTAGTTCTTTGGAGGATAGTGGAAAGGTGAAGGTGAAAGACGAAGAGAAGGTAGATCAGATTGACATTGGAAGAGAAAGAGAAGGAGAACCACTTGAATTGTGCTTTGACTATGATATTGATGATGATGGTGATGAGTCTCCAGTGACATATGAAGAGGTAGAAGAGAAGGTTGATTTGGACTTCACCAAAGATGTGATGAATGGTGGAGAACTCATCAAAGAGAATGATGAAGAAAAGAGGAGTGCATTGTTACAGTTAGATTATGAGGGAGTAATCACTGCCTGGGCAAGCCAAAAGTCCCCATGGGTTAATGGTGATAAACCAAACTTTGAGTCTCATCAGTGCTGGCCTCACTGCATGGGAAGTTATGGAATGCAGCTTCATTACCAACCTTATAGTGAATTGGGTGGATCATTGGGGGGTCATCCAGCAATGGGAGAAGGAGGAAGAGAAGCAAGGGTATTAAGGTATAGAGAAAAGAAGCAGACAAGGTTGTTCTCTAAGAAAATAAGATATGAGGTTAGAAAACTTAATGCAGAGAAGAGACCCAGAATGAAAGGGAGGTTTGTAAAGAGGGCTTCCTTTGCACCACCACCTACATTTCCTTTGCTTTAG 1251 0.4157 MNTAFAKNVANSVGSKTARACDSCITKRARWYCASDDAFLCEACDSSIHSANQLARKHQRVRLKITSCNYDAPTWHKGFTKKARTPRQKAKNPFHLVPEVGHWDDANSNEESEEKLLYRVPMLDPLAAELCTTPSSMAVVEALEVETSGTKGEEGKDSLGYKNYGVESLNGFLSLDTELEEFAADVESLLGKGLENECNIGMEELIHRKENFSSLEDSGKVKVKDEEKVDQIDIGREREGEPLELCFDYDIDDDGDESPVTYEEVEEKVDLDFTKDVMNGGELIKENDEEKRSALLQLDYEGVITAWASQKSPWVNGDKPNFESHQCWPHCMGSYGMQLHYQPYSELGGSLGGHPAMGEGGREARVLRYREKKQTRLFSKKIRYEVRKLNAEKRPRMKGRFVKRASFAPPPTFPLL 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0612 416 CDD Bbox1_BBX-like 20 63 - -
Lal22g0612 416 Pfam B-box zinc finger 18 61 IPR000315 GO:0008270
Lal22g0612 416 Pfam CCT motif 362 404 IPR010402 GO:0005515
Lal22g0612 416 ProSiteProfiles CCT domain profile. 362 404 IPR010402 GO:0005515
Lal22g0612 416 PANTHER CCT MOTIF FAMILY PROTEIN, EXPRESSED 7 410 - -
Lal22g0612 416 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 6 7 410 - -
Lal22g0612 416 ProSiteProfiles Zinc finger B-box type profile. 16 63 IPR000315 GO:0008270
Lal22g0612 416 SMART bboxneu5 16 63 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0612 Lal-Chr22 4291210 4293426 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal22g0612 7 404 C2C2-CO-like Transcription Factor Family AT1G25440 45.305 2.84e-95 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-CO-like Lal22g0612 zf-B_box 9.6e-08 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g0612 22 4291210 4293426 Lal22g0612 22 4291210 4293426 ECH