Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0610 ATGGCACCACCACTACCTTCTCTTCCCTTTCTCCACCTCACCGTCTTCACCTTCTTCTTCCACCACCACCACCTCCTCCACCTCACTGAAGCCACCGAAACCCCCGATCTCCAACCCTTACTCTCTTTCAAAACCGTTTCCGACACCCACAACAAACTCACTACATGGAACTCCACCACCCACCCATGCACCTGGTCCGGTATCTCATGCCTCAACAACCGCGTCTCACGTCTCGTCCTCCAAGACCTCAACCTCAGCGGTTCTATTCTCCCTCTAACCTCTCTCACACAACTCAGACTCCTCAGCCTTAAACGCAACCGTTTTAATGGCACCATCCCTTCCCTTTCCAATCTCACTTCCCTCAAACTTCTCTATCTCTCTCACAACTCCTTCTCTGGTCACTTTCCATCGTCCATCACTTCCCTCTCCCGCTTGTACCGTCTTGATCTTTCGTATAATAACTTATCCGGTACGTTTCCGGTGACGGTTAACAATTTGACTCACCTTCTAACTTTGAAAATTGATGGTAACCAAATCAGTGGTCACATTCCAGATATTAAACTTCCTAGTTTACGAGACTTCAGTGTCTCCGGTAACAGATTATCCGGTAGAATACCCGAATCTCTTTCGGGTTTCAATGGATCCGCTTTCGCAAGAAACGAAGACCTATGTGGAGTTCCATTGCAGAAATGCAAAGACATCACATATATCTTTTCGCCGTTAAATCCTCGCAACATTACTTCAGAAACAACCGTCCCATCTTCTCCGAGCTCAAAGCCATTACCCGGTAACCCGACCCGAAAACACGGAGCTCCGAAAATGGCTCCGGTGGTTTTAATCGCCATTATCGTCGGCGACGTTTTGGTTCTCGCCGTAGTCTCGGTGCTTCTATATTGCTATTTCTGGAGAAACTACTCTTCTAAAGAGAGTAAAACAATTAGAGAGTCAAAGTCAAAGTCAAACTCAGATTCGAAGGTTGTAGAAAAGACTGCTTATTGTTCAAGTGCATACCCTAATGGGTATGGGAAAGGTGGAATGGTGTTCTTTGAAGGGGCGAAGAGGTTTGAAGTAGAAGAGTTGCTTCGTGCTTCTGCTGAAATGCTTGGGAAAGGTGGGTTTGGAACATGCTACAAAGCTGTTCTTGAAGATGGGAGTGTTGTTGCAGTGAAGAGATTGAAAGAAGTTCATATTGGATTAGGGAAGAAAGAGTTTGAGCAACAAATGGAAGTTATTGGAAAGTTGAGACACCCAAATGTTGTTAGTTTAAAGGCTTATTACTTCGCTGGAGATGAGAAGTTGTTGGTTTATGATTACATTGCCAATGGTTCCTTGTTCTGGCTCCTTCATGGTAACCGAGGACCCGGGCGAACCCCACTAGACTGGACCACACGACTCAAAATAGCAACCGGAGCGGCTCAAGGTGTTGCTTTTATTCACAATACTAATAATAAGCTCACCCACGGTAACATCAAATCTACCAACATCCTCGTTGACGTGGCAGGCAATGCACACGTAGCAGATTTTGGCCTATCCATCTTCGCTATCAGATCAAATGGAAGAAAGTCCAATGGCTACTGCGCTCCTGAGGGCGGTCGAAAACAGACCCAGAAATCTGACGTGTACTCCTTTGGTGTCCTCCTCATGGAGATCCTGACCGGGAAGTGTCCCGCCGACGTGGACGGCGGAGACTACGGCGGAGCTTCGGTGGACCTTCCGAGATGGGTTCAGTCCGTGGTGAGGGAGGAATGGACGGCTGAGGTGTTTGATCTGGAACTCATGAGGTATAAGGATATTGAGGAGGAGATGGTTGCCCTCCTTAAGATAGCAATGGAGTGTACTGTAGCAGCACCTGATCAACGGCCTACGATGTGCCACGTGGTCAAGATGATCGAGGAGTTGCGTGGGGGCGTTGCATTCGAACATCGAGTCAGCATAGTTACATAG 1944 0.4753 MAPPLPSLPFLHLTVFTFFFHHHHLLHLTEATETPDLQPLLSFKTVSDTHNKLTTWNSTTHPCTWSGISCLNNRVSRLVLQDLNLSGSILPLTSLTQLRLLSLKRNRFNGTIPSLSNLTSLKLLYLSHNSFSGHFPSSITSLSRLYRLDLSYNNLSGTFPVTVNNLTHLLTLKIDGNQISGHIPDIKLPSLRDFSVSGNRLSGRIPESLSGFNGSAFARNEDLCGVPLQKCKDITYIFSPLNPRNITSETTVPSSPSSKPLPGNPTRKHGAPKMAPVVLIAIIVGDVLVLAVVSVLLYCYFWRNYSSKESKTIRESKSKSNSDSKVVEKTAYCSSAYPNGYGKGGMVFFEGAKRFEVEELLRASAEMLGKGGFGTCYKAVLEDGSVVAVKRLKEVHIGLGKKEFEQQMEVIGKLRHPNVVSLKAYYFAGDEKLLVYDYIANGSLFWLLHGNRGPGRTPLDWTTRLKIATGAAQGVAFIHNTNNKLTHGNIKSTNILVDVAGNAHVADFGLSIFAIRSNGRKSNGYCAPEGGRKQTQKSDVYSFGVLLMEILTGKCPADVDGGDYGGASVDLPRWVQSVVREEWTAEVFDLELMRYKDIEEEMVALLKIAMECTVAAPDQRPTMCHVVKMIEELRGGVAFEHRVSIVT 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0610 647 CDD STKc_IRAK 368 633 - -
Lal22g0610 647 SUPERFAMILY Protein kinase-like (PK-like) 366 630 IPR011009 -
Lal22g0610 647 Pfam Leucine rich repeat 120 179 IPR001611 GO:0005515
Lal22g0610 647 SUPERFAMILY L domain-like 53 212 - -
Lal22g0610 647 Gene3D Phosphorylase Kinase; domain 1 345 438 - -
Lal22g0610 647 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 27 639 - -
Lal22g0610 647 Pfam Protein kinase domain 366 628 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal22g0610 647 Gene3D Transferase(Phosphotransferase) domain 1 439 641 - -
Lal22g0610 647 MobiDBLite consensus disorder prediction 247 269 - -
Lal22g0610 647 Pfam Leucine rich repeat N-terminal domain 35 70 IPR013210 -
Lal22g0610 647 ProSitePatterns Protein kinases ATP-binding region signature. 368 390 IPR017441 GO:0005524
Lal22g0610 647 ProSiteProfiles Protein kinase domain profile. 362 633 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal22g0610 647 PANTHER - 27 639 - -
Lal22g0610 647 Gene3D Ribonuclease Inhibitor 28 87 IPR032675 -
Lal22g0610 647 Gene3D Ribonuclease Inhibitor 88 235 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0610 Lal-Chr22 4277297 4280595 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal22g0610 36 636 Receptor kinase-like Gene Family AT1G68400 61.502 0.0 709
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lal22g0610 Pkinase 2e-34 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g0610 22 4277297 4280595 Lal22g0610 22 4277297 4280595 ECH