Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal22g0609 ATGGCCTCTCGCGAAGGGAGGCGGCGCCATCATGATCTTGTGCCTCTTTCTGTGTTGCTTAGCAGAGAGATGAAGAATGAGAAGATGGAGAAGCCCACTGTGAGGTATGGATATGCTGCTCAGTCTAAGAAAGGGGAGGATTACTTTCTAATTAAGACTGATTGTCACCGAGTGCCTGGGAATAATTCATCATCATTCTCTGTATTCGCGATCTTTGATGGGCATAATGGAGATGCTGCAGCCATTTTTACTCGGGAGAATTTGTTAAATCATGTGTTGGGTGCTCTGCCTCGAGGGCTTGGACCAGAGGAGTGGCTACAAGCTTTACCTCGGGCATTGGTTGCTGGGTTTGTGAAGACTGACAAGGAATTTCAGAGAAGAGGAGAAACTTCTGGAACCACAGCTACATTTGTTATAGTGGATAGGTGGACTGTGACAGTTGCATGCGTTGGAGATTCCCGTTGTATACTAGATGCCCAGGGCGGTGCTGTTACGAACTTAACTGTTGATCACAGGCTTGAGGAGAACATTGAAGAGAGGGAACGTGTTACTGCAAGTGGAGGCGAAGTTGGGAGGCTTAGCATTGTTGGTGGTGCTGAGATTGGTCCCCTTCGATGCTGGCCCGGGGGTCTATGCCTTTCTAGATCTATAGGAGACATGGATGTCGGAGAGTTTATAGTTCCAATACCATATGTTAAACAAGTGAAGCTTTCGAAGGCCGGTGGGAGGCTTATAATTGCTTCTGATGGCATCTGGGATGCTCTATCATCAGAAATTGCTGCAAAATCTTGCCACGGTTTGCCTGCTGAACTTGCTGCTAAGCAGGTTGTAAAGGAAGCACTACGGACAAGAGGGTTAAAGGACGACACGACTTGCATTGTAGTTGACATAATCCCACCTGATAATGAATTGCCACCACCAACCCCTCCTAAAAAGCAAAACATATTCAGATCACTTTTGTTCAGGAAGAGATCCAATGATTCTGTTGGTAAACTGTCAAAGAAGCTTTCAGCTATAAATATAGTGGAGGAATTATTCGAAGAAGGATCGGCCATGCTTGCTGAAAGATTAGGAAATGATGACAATTCAGGACAATCAACATGTGGCATTTTCATATGTGCTGTATGCCAAGTTGACCTTGGTTCAAGTGAGGGTATATCTGTCCATGCAGGTTCTATATTTTCCACTAGTTCAAAGCCTTGGCAAGGTCCTTTTCTATGTGCTGATTGTCGCAATAAGAAGGATGCTATGGAAGGGAAACGTCCTAGTGGAGTTAAAGTTTCTTAG 1287 0.4514 MASREGRRRHHDLVPLSVLLSREMKNEKMEKPTVRYGYAAQSKKGEDYFLIKTDCHRVPGNNSSSFSVFAIFDGHNGDAAAIFTRENLLNHVLGALPRGLGPEEWLQALPRALVAGFVKTDKEFQRRGETSGTTATFVIVDRWTVTVACVGDSRCILDAQGGAVTNLTVDHRLEENIEERERVTASGGEVGRLSIVGGAEIGPLRCWPGGLCLSRSIGDMDVGEFIVPIPYVKQVKLSKAGGRLIIASDGIWDALSSEIAAKSCHGLPAELAAKQVVKEALRTRGLKDDTTCIVVDIIPPDNELPPPTPPKKQNIFRSLLFRKRSNDSVGKLSKKLSAINIVEELFEEGSAMLAERLGNDDNSGQSTCGIFICAVCQVDLGSSEGISVHAGSIFSTSSKPWQGPFLCADCRNKKDAMEGKRPSGVKVS 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal22g0609 428 Pfam Protein phosphatase 2C 61 281 IPR001932 -
Lal22g0609 428 ProSiteProfiles PPM-type phosphatase domain profile. 28 297 IPR001932 -
Lal22g0609 428 Gene3D - 34 301 IPR036457 -
Lal22g0609 428 PANTHER ALPHABET, ISOFORM E-RELATED 2 427 - -
Lal22g0609 428 CDD PP2Cc 36 297 IPR001932 -
Lal22g0609 428 SUPERFAMILY PP2C-like 34 297 IPR036457 -
Lal22g0609 428 SMART PP2C_4 25 295 IPR001932 -
Lal22g0609 428 PANTHER PROTEIN PHOSPHATASE 2C 15-RELATED 2 427 - -
Lal22g0609 428 SMART PP2C_SIG_2 30 297 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal22g0609 Lal-Chr22 4271209 4275585 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal22g0609 1 427 PP2C-type Phosphatase Gene Family AT1G68410 79.817 0.0 702
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g0609 22 4271209 4275585 Lal22g0609 22 4271209 4275585 ECH