Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0577 ATGGACACATCTCAGTGGGCACAGGGTACTGGAGTGGTTAAACCTAGGGAAGGTTCTTCAATGCAACCTCCTATGTTAGAGAGATCAAGGGCAAGGCCTCAAAAAGATCAAGTTTTGAACTGTCCAAGGTGCAATTCAACAAACACAAAATTTTGTTACTACAATAACTATAACCTCTCTCAGCCAAGGTACTTTTGCAAGACATGTAGAAGGTATTGGACTGAAGGTGGGTCTTTGAGAAATGTTCCTGTTGGTGGTGGTTCAAGAAAGAACAAAAGATCCACTCCTTCATCATCAACTCCATCAAATAAGAAGCTTTCTGATCTATCAACAACACCAAACAATAATTTCCCTCACTCAGCTTCTCAAAACCCAAATATCCATCAAGGCCAAGATCTTAACTTAGCTTATCCACCACTAACTGAAGACTATAGCACCTTATCTAAATTTATTGAGGTTCCTTACAGCACTGAATTAGATAAGACACAGCATCACCTTCAGAATCCAAGTTCCTCAGCTATGGAACTTCTCAAAACTGGGACCATTTCTTCTTTCATGCCCATGACCCTGACAGATTCAAGCACAATGTATAACTCAAATGGTTTCCCACCGTTGCAAGGGTTTATTAAGCCTGGCCTTAACTTCAGTCTTGAAGGGTTTGAGAATGGCTATAGTAGTCTCCATGGAATTCATCATCAAGATGGTGCTAATGGTGCAAGGATCTTGTTTCCTCCTCCTGAGAATTTGAAGCAACAGGTTCAAAGCAGTGCTGAGTTTAATGATCAAAATAGAAATCAAGGGGATTCAAGTGGATATTGGAATGGAATGTTAGGTGGAGGATCATGGTAG 849 0.4064 MDTSQWAQGTGVVKPREGSSMQPPMLERSRARPQKDQVLNCPRCNSTNTKFCYYNNYNLSQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKRSTPSSSTPSNKKLSDLSTTPNNNFPHSASQNPNIHQGQDLNLAYPPLTEDYSTLSKFIEVPYSTELDKTQHHLQNPSSSAMELLKTGTISSFMPMTLTDSSTMYNSNGFPPLQGFIKPGLNFSLEGFENGYSSLHGIHHQDGANGARILFPPPENLKQQVQSSAEFNDQNRNQGDSSGYWNGMLGGGSW 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0577 282 MobiDBLite consensus disorder prediction 80 133 - -
Lal21g0577 282 MobiDBLite consensus disorder prediction 1 35 - -
Lal21g0577 282 PANTHER DOF ZINC FINGER PROTEIN DOF1.8 11 278 - -
Lal21g0577 282 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 11 278 IPR045174 GO:0003700|GO:0006355
Lal21g0577 282 MobiDBLite consensus disorder prediction 88 131 - -
Lal21g0577 282 MobiDBLite consensus disorder prediction 256 272 - -
Lal21g0577 282 ProSiteProfiles Zinc finger Dof-type profile. 39 93 IPR003851 GO:0003677|GO:0006355
Lal21g0577 282 MobiDBLite consensus disorder prediction 256 282 - -
Lal21g0577 282 ProSitePatterns Zinc finger Dof-type signature. 41 77 IPR003851 GO:0003677|GO:0006355
Lal21g0577 282 Pfam Dof domain, zinc finger 36 93 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0577 Lal-Chr21 4294142 4296451 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal21g0577 26 282 C2C2-Dof Transcription Factor Family AT3G61850 44.604 6.51e-53 173
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Lal21g0577 zf-Dof 1e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g0577 - - lang:109326143 439.499
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g0568 22 3873537 3874364 Lal21g0577 21 4294142 4296451 ECH
Lal5g0049 5 538478 539173 Lal21g0577 21 4294142 4296451 ECH
Lal18g1044 18 13449850 13451997 Lal21g0577 21 4294142 4296451 ECH
Lal21g0577 21 4294142 4296451 Lal21g0577 21 4294142 4296451 ECH