Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0228 ATGGCTTCCAGCTTCGACCTTTGGGAAAAAGATCCTTTCTTTAACGCTGCCGAAGAAGTTCAGGAATCTTCAGACAGGATGGAATATGCATATAGGACATGGATTCATGCAAAGAAAGACCCGTTGAGCTCATGGAACACTGACGAACTCCGACGAGATTTACACACTGCTAAATGGCAGCTAGATGAATTCCAAAGGGCAGTTAGTTCAAGTTATAGCAAAAGCTCAAGTGAGGATGCAGTCGCCAGACATAGAGTCTTTATTTCTGCCATCGAGGACAAAATTACAGAAATCGAGCGTGGGTTACTTCAATCCGCGCATTCAGGTGATAAGGTGTCTCTGCCTTGGGTGCTTCTGGACGAAGGGGAACGGGATGAGCTTGCATTATTTCTTTCAGGAATGTCTACTTCTGAACCCAAAAGTCCCCATAAATGTATTCGCAGTGGAAGTGAGAATTTACAATCAAGTGATAAAGATTCATTCAGCAATGTTTCAGACAATTTGCGTGTTTCGTCTGGGAAGGGCTCCTCTGAAGCAATGGAGGTGAAATCACATGAGCATAGTAGAATAGCTAGTGCTGATGCTGATATCACTTCTCGGAAAATTGCTGTTTCTGTGCAAATGCAGAATCCCTCCAATAATTCTTCTGGTCCTATGCATAAGGTAGCCAATCTCTCTGGGTTTCTTAATTTTATGGCATATGTCTCTAAGTGGAAGTGGCCTAAGAATGGTTATCAAAAGCTGCAAGCAGTGAATCATCATCAAGGAACAGTTGATACACTACTACCTACTACTCAATCGAATCGGGACATCAATAAATGCTATGGAAAGAGTAAGAGTTACCTAGAAAGCTGTGATGAATGTTATGATAAGCAGCTCTATGGGTGGTATGGGTCTATCCAAAGACAGCTTCAAAGATCTCAATACCAAATGCAATATAATCGGCCTGTTCAACTAACTTTTTGGATGATTATTTTCCTCTGCTTGATTGAGGTTATTTTCCATGATTTTCTTGTTCCTGTTGGTTTTATTTCTGTCAGCATCTTTGTGCTTCTTACTGGTCTATACTCAATAGCTGTTTGA 1083 0.4118 MASSFDLWEKDPFFNAAEEVQESSDRMEYAYRTWIHAKKDPLSSWNTDELRRDLHTAKWQLDEFQRAVSSSYSKSSSEDAVARHRVFISAIEDKITEIERGLLQSAHSGDKVSLPWVLLDEGERDELALFLSGMSTSEPKSPHKCIRSGSENLQSSDKDSFSNVSDNLRVSSGKGSSEAMEVKSHEHSRIASADADITSRKIAVSVQMQNPSNNSSGPMHKVANLSGFLNFMAYVSKWKWPKNGYQKLQAVNHHQGTVDTLLPTTQSNRDINKCYGKSKSYLESCDECYDKQLYGWYGSIQRQLQRSQYQMQYNRPVQLTFWMIIFLCLIEVIFHDFLVPVGFISVSIFVLLTGLYSIAV 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0228 360 Pfam Syntaxin 6, N-terminal 11 99 IPR015260 GO:0016020|GO:0048193
Lal21g0228 360 MobiDBLite consensus disorder prediction 135 191 - -
Lal21g0228 360 PANTHER OS05G0443700 PROTEIN 1 335 - -
Lal21g0228 360 Gene3D - 9 105 - -
Lal21g0228 360 MobiDBLite consensus disorder prediction 135 178 - -
Lal21g0228 360 PANTHER EXPRESSED PROTEIN 1 335 - -
Lal21g0228 360 SUPERFAMILY t-snare proteins 10 102 IPR010989 GO:0016020|GO:0016192
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0228 Lal-Chr21 1509699 1512216 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g0228 21 1509699 1512216 Lal21g0228 21 1509699 1512216 ECH
Lal21g0228 21 1509699 1512216 Lal4g0143 4 882364 885924 LSH
Lal10g0845 10 16021562 16024479 Lal21g0228 21 1509699 1512216 PCT
Lal21g0228 21 1509699 1512216 Lal10g0845 10 16021562 16024479 PCT