Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0218 ATGGGAGGATGGGCTATCGCTGTGCATGGTGGTGCTGGTGTGGACCCTAATCTCCCACCACAACGCCAACAACAAGCCAAGGAACTCCTCACTCGTGTTCTTAATCTTGGCATCTCTTCTCTTCGTTCCAATGCTTCCGCCATCGATGTTGTTGAACTTGTCGTTAGAGAACTGGAAACTGATCCACTGTTTAACTCAGGGCGTGGATCTGCTTTAACGGAGAAAGGAACGGTTGAGATGGAAGCGAGTATCATGGATGGTACAAAGAGAAGATGCGGCGCCGTATCAGGACTTACCACCGTGAAAAATCCTATCTCACTCGCTCGTCTAGTAATGGATAAATCTCCTCATTCCTATCTTGCCTTTTCTGGTGCTGAAGATTTCGCTAGACAACAGGGCGTGGAGTTGGTGGAGAACGAGTACTTCATCACTCCTGAAAACGTTGGAATGTTGAAATTGGCGAAAGAAGCAAATACAATTCTGTTCGATTACAGGATTCCAACATACGACACATGCAGTGCAGCAATTGAGAGTCCTTTAGTTATGAACGGACTCCCAATCAATGTATACGCGCCGGAGACGGTTGGGTGCGTGGTGGTGGACCGGGAGGGCCGGTGTGCGGCTGCAACGTCAACAGGGGGACTCATGAACAAGATGACCGGTAGGATCGGTGACTCGCCAATGATAGGTGCTGGAACATACGCTTGTGAAGTGTGTGGTGTGTCATGTACTGGTGAAGGGGAAGCAATCATACGCGGGACGCTGGCGCGTGAGGTGGCAGCTGTGATGGAATACAAAGGATTAGGACTTCAAGATGCCGTGGATTTTGTTATTAAGAATAGGCTTGATGAAGGGTTCGCTGGTCTGATAGCAGTGTCAAATACGGGTGAAGTGGCTTATGGGTTTAACTGTAATGGCATGTTTAGGGGATGTGCTTGTGAAGATGGGTTCATGGAAGTTGGGATATGGGAGTAG 975 0.4882 MGGWAIAVHGGAGVDPNLPPQRQQQAKELLTRVLNLGISSLRSNASAIDVVELVVRELETDPLFNSGRGSALTEKGTVEMEASIMDGTKRRCGAVSGLTTVKNPISLARLVMDKSPHSYLAFSGAEDFARQQGVELVENEYFITPENVGMLKLAKEANTILFDYRIPTYDTCSAAIESPLVMNGLPINVYAPETVGCVVVDREGRCAAATSTGGLMNKMTGRIGDSPMIGAGTYACEVCGVSCTGEGEAIIRGTLAREVAAVMEYKGLGLQDAVDFVIKNRLDEGFAGLIAVSNTGEVAYGFNCNGMFRGCACEDGFMEVGIWE 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0218 324 PANTHER L-ASPARAGINASE 1 324 IPR000246 GO:0016787
Lal21g0218 324 CDD Asparaginase_2 5 316 - -
Lal21g0218 324 PANTHER PEPTIDASE T2, ASPARAGINASE 2, NUCLEOPHILE AMINOHYDROLASE-RELATED 1 324 - -
Lal21g0218 324 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 4 321 IPR029055 -
Lal21g0218 324 Pfam Asparaginase 4 323 IPR000246 GO:0016787
Lal21g0218 324 Gene3D (Glycosyl)asparaginase 194 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0218 Lal-Chr21 1447036 1449179 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal21g0218 6 284 Miscellaneous Gene Families AT4G00590 26.073 9.43e-18 81.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g0218 21 1447036 1449179 Lal21g0218 21 1447036 1449179 ECH
Lal21g0218 21 1447036 1449179 Lal4g0133 4 839206 840738 LSH
Lal10g0835 10 15966627 15969300 Lal21g0218 21 1447036 1449179 PCT
Lal21g0218 21 1447036 1449179 Lal10g0835 10 15966627 15969300 PCT