Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0213 ATGGAAGCTGGAGAAGATTGTTGCGTGAAGGTTGCGGTGCATGTACGGCCACTCATCACCGACGAGAAGCTTCTAGGTTGCAAAGATTGTGTAACCGTCGTCCCGGCCAAGCCTCAGGTACAAATTGGCACTCACTCCTTTACATTTGATCATGTTTATGGAAGCACCGGTTCTCCCTCATGTGCCATGTTCGAAGAATGTGTTGCTCCTCTTGTTGATGGTTTGTTCCAAGGATATAATGCTACCGTTCTTGCATATGGTCAGACAGGTTCTGGGAAAACATACACCATGGGCACAGGCATTAAAGATGGTTATCAAACCGGAATAATACCCCAAGTTATGAATGTTCTCTTCAACAAAATTGGGACATCAAAGCACCAGACTGAATTTCAGTTGCATGTTTCCTTTATTGAGGTTAAGTATCTGACAATAACATTTCGTTGTGAAAAGATTCTTAAAGAGGAAGTCAGAGACTTGTTGGATCCCTCCTCCATGAGTAAACCAGACACTGTTAATGGACATGTGGGAAAAGCGACCTCTCCTGGGAAACCACCAATACAAATTCGTGAGACGTCAAATGGTGTCATTACCCTAGCAGGGTCTACTGAAGTCAGTGTTTCAACACTGAAGGAAATGGCTGCTTGCCTGGAACAGGGTTCGTTGAGCAGAGCAACCGGGAGCACAAATATGAACAACCAATCCAGTCGATCTCATGCCATCTTCACTATCACATTAGAGCAAATGCAGAAGATCAATATTCCCAACGATAGCAGTTTAAATGATACTATGAATGAAGATTATCTTTGTGCCAAGTTGCACTTAGTAGATCTTGCTGGATCAGAACGAGCTAAAAGAACAGGGTCTGATGGTCTGCGTTTCAAGGAAGGAGTTCACATTAACAAAGGTCTTTTAGCACTTGGCAATGTTATTAGTGCACTTGGTGATGAAAAGAAGCGGAGGGAAGGCCTTCATGTTCCATATAGGGATAGTAAACTTACAAGGCTTTTACAGGATTCACTTGGTGGTAACAGCAGAACTGTTATGATAGCCTGCATAAGTCCTGCTGATATTAATGCGGAGGAAACCCTCAACACTCTGAAGTATGCAAATCGTGCGCGCAATATCCAAAATAAGCCTGTGATCAATAGAGACCCGATGTCCAATGAGATGCTAAAAATGCGACAACAGCTAGAGTATTTGCAGGCACAACTTTGTGCTCATGCTGGTGGTTCTTCTGTGGAAGTTCAGGTCCTCAAGGAAAGGATTGCTTGGCTTGAAGCTGCTAATGAAAATCTTTGCCGTGAACTTCATGAGTACCGCAGTAGATGCTCTGTCGTTGAACAATGTGAAAAAGATGCTTATGATGGCAGCATATGCATTGCAAAGATTGATGGACTTAAGAGGAGCTTACCCATCATAGGGCCTGATTATCCAATGAATGAAACTGCAGGTGGTTCAAGGGAAATTGAAGAAGTGGCAAAAGAGTGGGAGCACACACTTCTGCAAAATAGCATGGACAAAGAATTGCATGAGTTGAATAAGCGCTTGGAGCAGAAAGAGTCTGAGATGAAGCTTTTCGGAGCATCTGATGCTGAAGTACTCAAGCAGCACTTTGGAAGGAAGATCATGGAATTGGAGGATGAAAAGAGAGTTGTGCAGCAAGAGAGAGATTGTCTTTTGGTTGAAGTTGAAAACCTTGCTGCCAATTCTGATGGACAAACACAGAGATTAGAGGATATCCATGCCTATAAATTGAAAGCACTTGAAGCACAGATTATGGATTTGAAGAAGAAAAAAGAGAGCCAGGTCCAGCTTATGAAGCAAAAGCAAAAAAGTGACGAAGCAGCAAAAAGACTGCAAGATGAAATACAATCTATAAAGGCTCAAAAGGTTCAATTGCAACAAAGGATAAAACAAGAGGCAGAACAGTTTCGGCAGTGGAAGGCTTCTAGAGAGAAAGAGCTGCTGCAATTAAAGAAGGAGGGAAGAAGAAATGAGTATGAAAGGCATAAGCTACAAGCTTTAAATCAGCGTCAGAAAATGGTCCTTCAGAGGAAAACTGAAGAAGCTGCTATGGCCACCAAGAGGTTAAAGGAGTTGCTAGAAGCTCGCAAAACCTCCATCCGAGACGCTTTAGTTACGATGAATGGAAGTGGAACAAATGGGCAGGGCAATGAGAAGTCCTTACAACGGTGGCTTGATCATGAGCTAGAAGTCATGATAAAAGAGCAAGAAGTTCGTTTTGAGTATGAGAAGCAGAGCCAAGTGCGAGCTGCCCTTGCAGAGGAGTTAGCCATGCTGAAGCAAGTGAACGAATTTACTGCTAAGGGTCTCAGTCCTCCGAGAGGAAAGAATGGATTTGCTAGAGCATCATGCATGTCACCACATGCAAGAACGGCCAGAATAGCTTCACTTGAGAACATGCTGATCATATCATCTAATTCACTTGTGGCAATGGCTTCTCAACTTTCTGAGGCAGAAGAACGAGAACGGGCCTTCACTAGTCGTGGACGCTGGAATCAGTTGCGCTCAATGGGAGAAGCGAAGAATTTGCTTCAGTATATGTTTAATTCTGTTGCAGATGCTAGGTGCCAGATCTGGGAGAAGGACACAGAGTTCAGGGAAATGAAAGATCAAATCAAAGAACTTGTCGGTCTATTACGACAAAGTGAGATGAAGAGAAAGGAAGCTGAGAAGGAGCTAAAAGTGAGAGAGCAAGCTGTTGCAACTACATTGGCTACACCAGCTTCTGGAAACTCTCCAAATTCATTGAAACACTATGCTGAAGACATGAAGGGTCCCTCATCTCCAATGCCTATGCCAATGCCAAAACAGCTAAAGTTTATGCCCGGGGTTGCTAATGGCTTAGTGAGGGAATCAGCAGCATTTATGGATCAGAAAAGTCGGATGGTACCCATTGGGCAGCTTTCAATGAAAAAACTAGCAGCTGTGGGACAAGCTTCTGGCAAGCTATGGAAGTGGAAAAGAAGCCATCACCAGTGGCTACTACAGTTCAAGTGGAAGTGGCAGAAGCCATGGAGACTTTCGGAATTGATTCGACACAGCGATGAGACAATCATGAAAGCAAGGCCACGTTCACAGGCTTTGCTACCTAGCAGGTGA 3123 0.4377 MEAGEDCCVKVAVHVRPLITDEKLLGCKDCVTVVPAKPQVQIGTHSFTFDHVYGSTGSPSCAMFEECVAPLVDGLFQGYNATVLAYGQTGSGKTYTMGTGIKDGYQTGIIPQVMNVLFNKIGTSKHQTEFQLHVSFIEVKYLTITFRCEKILKEEVRDLLDPSSMSKPDTVNGHVGKATSPGKPPIQIRETSNGVITLAGSTEVSVSTLKEMAACLEQGSLSRATGSTNMNNQSSRSHAIFTITLEQMQKINIPNDSSLNDTMNEDYLCAKLHLVDLAGSERAKRTGSDGLRFKEGVHINKGLLALGNVISALGDEKKRREGLHVPYRDSKLTRLLQDSLGGNSRTVMIACISPADINAEETLNTLKYANRARNIQNKPVINRDPMSNEMLKMRQQLEYLQAQLCAHAGGSSVEVQVLKERIAWLEAANENLCRELHEYRSRCSVVEQCEKDAYDGSICIAKIDGLKRSLPIIGPDYPMNETAGGSREIEEVAKEWEHTLLQNSMDKELHELNKRLEQKESEMKLFGASDAEVLKQHFGRKIMELEDEKRVVQQERDCLLVEVENLAANSDGQTQRLEDIHAYKLKALEAQIMDLKKKKESQVQLMKQKQKSDEAAKRLQDEIQSIKAQKVQLQQRIKQEAEQFRQWKASREKELLQLKKEGRRNEYERHKLQALNQRQKMVLQRKTEEAAMATKRLKELLEARKTSIRDALVTMNGSGTNGQGNEKSLQRWLDHELEVMIKEQEVRFEYEKQSQVRAALAEELAMLKQVNEFTAKGLSPPRGKNGFARASCMSPHARTARIASLENMLIISSNSLVAMASQLSEAEERERAFTSRGRWNQLRSMGEAKNLLQYMFNSVADARCQIWEKDTEFREMKDQIKELVGLLRQSEMKRKEAEKELKVREQAVATTLATPASGNSPNSLKHYAEDMKGPSSPMPMPMPKQLKFMPGVANGLVRESAAFMDQKSRMVPIGQLSMKKLAAVGQASGKLWKWKRSHHQWLLQFKWKWQKPWRLSELIRHSDETIMKARPRSQALLPSR 1040
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0213 1040 Coils Coil 585 650 - -
Lal21g0213 1040 Coils Coil 535 562 - -
Lal21g0213 1040 MobiDBLite consensus disorder prediction 163 188 - -
Lal21g0213 1040 Gene3D Kinesin motor domain 2 404 IPR036961 -
Lal21g0213 1040 ProSiteProfiles Kinesin motor domain profile. 8 375 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal21g0213 1040 CDD KISc_KIF4 7 376 - -
Lal21g0213 1040 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 9 406 IPR027417 -
Lal21g0213 1040 ProSitePatterns Kinesin motor domain signature. 270 281 IPR019821 GO:0003777|GO:0005524|GO:0007018
Lal21g0213 1040 SMART kinesin_4 6 383 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal21g0213 1040 PRINTS Kinesin heavy chain signature 78 99 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal21g0213 1040 PRINTS Kinesin heavy chain signature 228 245 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal21g0213 1040 PRINTS Kinesin heavy chain signature 271 289 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal21g0213 1040 PRINTS Kinesin heavy chain signature 325 346 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal21g0213 1040 PANTHER CHROMOSOME-ASSOCIATED KINESIN KIF4A-LIKE PROTEIN 2 1036 - -
Lal21g0213 1040 Coils Coil 502 522 - -
Lal21g0213 1040 Coils Coil 683 703 - -
Lal21g0213 1040 Coils Coil 880 907 - -
Lal21g0213 1040 PANTHER CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED 2 1036 - -
Lal21g0213 1040 Pfam Kinesin motor domain 36 375 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal21g0213 1040 Coils Coil 415 442 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0213 Lal-Chr21 1393775 1404848 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal21g0213 9 403 Calmodulin-binding Proteins AT5G65930 33.251 4.77e-51 194
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g0213 21 1393775 1404848 Lal21g0213 21 1393775 1404848 ECH
Lal21g0213 21 1393775 1404848 Lal4g0130 4 799875 811321 LSH
Lal8g0647 8 4560200 4572614 Lal21g0213 21 1393775 1404848 PCT
Lal21g0213 21 1393775 1404848 Lal8g0647 8 4560200 4572614 PCT