Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0212 ATGGGCATGAAATGGATACATGTTGCAGTTGTGGCATCTGTTGTAGGATGTGTTTCGACCCTTTTGGTGGTTTTCATTTTTCGTTGGTGTCATAAAAGAAAGCATACAAATTTTGTTGGACCTAATAGCCTAACCAGAATAGATAGTATCCAAGGAGAGATTTCTATACTTCAACACCAACCTAGTTTCTCTACTCAATTGGATCATCATCAAGGGAGCAAGAGCTCCAACAAGGGAAATAATTATTATATGATTCGCGGTCGAAGACGAAATTTGTTCAGTTGGGTTGATCATCCTTCTTTAGCAGCTGATGATGCTGTTGAAAATGGTTGGTCTCGTTTTGCTTTCACAACCAATGACAGTTATATACCCTCTGTTTCAAAGAGATCAGGATTTTTAGGAGTATGTGCAGCACCAGCACCAGTTTCAGGTTATTATGGAAGTGAATCTGAGACTGAGATAAGCTGGGAAATTTACCAGGGATCTTCTGAATTTATGCAGAAGGTAAGAATGAAATCTGGGTTGAAAAAATCTCATCAAAGTAAAAACAATACCTCTTTTATGAATGTTGATTCTGTCATTAGAACGGCTCTGCCTCTGCCTGGTCCTCATTTGGGAAACTATGCTTTCCCACAAGAAGCTTATTTTGAAATTACTATATTGCATTCTTGTGTTGATGACTATGAATCTGTTGGAAAGAGTAGAGAAGGTGAGAAGACAAAGTTGCTCCTTATTCAAGGTAAATCAAATTCTAAAGAGAATTCAGATGCTATGGTCCATGTTACAAGCAACAGTAATAATAATAACAAAATCAACAGTGCTGAAGAAATGAAAGTTGAGAGTAAAGAAAGTAGAAAGAGTGAATATGTGATGTTCTCATTGGGTTTAACAACTGGAGGTTCTGTTCCTTTGAGAGTTCCAGGTAGCTACCCTGGGAGCATTGGGTTCAATTCCAACGGTTCCGTCTATCTTGAAGGAATGAAACTTGTATTTGAATCTGAGAAGGCAGAATGGGTAGGAACTGATAGGGTGATTGGTTGTGGGTTTGATCCTAGGCAGAAGAGGGTTTTATTCACATTAGACTCAGAATTGGTGCATGTCATCCACTGCCAGCAAGAGGAATTTGGCACTCCACTCTATCCAATCATGGCTGCAAATATAAACATTACGGTATTAGTTAACTTTGGACAAAGTGCATTCAAATATGCACCTGCAAATGCACAAAGAACACCAAATCCTTGCTTTACAGACCCACTTGTAAGTTGCCCTGCTGCTACTCTGGGTGACGATGATAGCAAGGAGCTTTTCTCCATGAGAAGGATTGATTCTCATTGGTTTAATCGGTTTACAGCCAAAGGAAGCCACAACAATGACAACGATAATAATCGAGCAATAGAATATGATGAAGAGTCTGAGGCCGATCTATTTGAAATCGTCTTAGATGGTTCAGGAAAATCTCCAAACACAACATCATAG 1476 0.3909 MGMKWIHVAVVASVVGCVSTLLVVFIFRWCHKRKHTNFVGPNSLTRIDSIQGEISILQHQPSFSTQLDHHQGSKSSNKGNNYYMIRGRRRNLFSWVDHPSLAADDAVENGWSRFAFTTNDSYIPSVSKRSGFLGVCAAPAPVSGYYGSESETEISWEIYQGSSEFMQKVRMKSGLKKSHQSKNNTSFMNVDSVIRTALPLPGPHLGNYAFPQEAYFEITILHSCVDDYESVGKSREGEKTKLLLIQGKSNSKENSDAMVHVTSNSNNNNKINSAEEMKVESKESRKSEYVMFSLGLTTGGSVPLRVPGSYPGSIGFNSNGSVYLEGMKLVFESEKAEWVGTDRVIGCGFDPRQKRVLFTLDSELVHVIHCQQEEFGTPLYPIMAANINITVLVNFGQSAFKYAPANAQRTPNPCFTDPLVSCPAATLGDDDSKELFSMRRIDSHWFNRFTAKGSHNNDNDNNRAIEYDEESEADLFEIVLDGSGKSPNTTS 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0212 491 Gene3D - 161 410 IPR043136 -
Lal21g0212 491 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 17 - -
Lal21g0212 491 PANTHER RAN BINDING PROTEIN 9-RELATED 3 487 - -
Lal21g0212 491 SMART SPRY_3 211 399 IPR003877 GO:0005515
Lal21g0212 491 PANTHER SPLA/RYANODINE RECEPTOR (SPRY) DOMAIN PROTEIN 3 487 - -
Lal21g0212 491 Pfam SPRY domain 296 397 IPR003877 GO:0005515
Lal21g0212 491 SUPERFAMILY Concanavalin A-like lectins/glucanases 294 402 IPR013320 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0212 Lal-Chr21 1382780 1385197 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g0212 21 1382780 1385197 Lal21g0212 21 1382780 1385197 ECH
Lal8g0644 8 4535182 4538931 Lal21g0212 21 1382780 1385197 PCT
Lal21g0212 21 1382780 1385197 Lal8g0644 8 4535182 4538931 PCT