Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0167 ATGTGCTCCTCAACCTCTTATTCTGGTAGTGGTAGCAATGGAAGTGCTGGCTTTTTCCACTATGATACTACTGTCAATAACTTTGGTCATCATGGTGAACCTACATTGAGCTTAGGCTTTGAAACCACAGATTTGAACCCCCAACCCGTTGTACAACAAGGAAGAAATTTCAATGACCAGCTCCATAACTATCAACCTCGTATACATAGCCGAGATTTCAAACGAAATGCAAGAGTTGTAAAAAGAAGCATCAGAGCTCCTAGAATGAAATGGAATGCTACCCTCCATGCTCATTTTGTTCATGTGGTTCAGCTTCTTGGTGGTCCTGAAAGGGCAACTCCGAAGTCTGTGTTAGAGTTAATGAATGTTAAGCATCTAACCCTAGCTCACGTCAAGAGTCACTTGCAGATGTATAGAACAGTGAAGAGCACTGACAAGGGAAAAGGTCATGGACATACAGATATGAGGCTGAGGCAAAGACCAGGGAAAATAGATTTGCATGGAGTCTCAACTTTTGAGAAATCTAATTTGCCAAAGTCTATGCAAAAATCCTATAGGGAATCATGGCAATCATCAAATAGTAGACAAAACCCAGAAATCAATTTGATGTATTCTCATCTCAACAGAAACGAAATCATGATAAATGGACAGAATTGTGGAGGCCTATGGAATTGCACGACGGAGAGATTGGATTATAGCTCTTTATCACGTTCTAAAGTGATGCTTGATTTAGAATTCAAACTTGGAAGGCCTCCTTTGCAAACAGATCTACCACACTGA 780 0.4051 MCSSTSYSGSGSNGSAGFFHYDTTVNNFGHHGEPTLSLGFETTDLNPQPVVQQGRNFNDQLHNYQPRIHSRDFKRNARVVKRSIRAPRMKWNATLHAHFVHVVQLLGGPERATPKSVLELMNVKHLTLAHVKSHLQMYRTVKSTDKGKGHGHTDMRLRQRPGKIDLHGVSTFEKSNLPKSMQKSYRESWQSSNSRQNPEINLMYSHLNRNEIMINGQNCGGLWNCTTERLDYSSLSRSKVMLDLEFKLGRPPLQTDLPH 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0167 259 SUPERFAMILY Homeodomain-like 84 141 IPR009057 -
Lal21g0167 259 Gene3D - 86 143 - -
Lal21g0167 259 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 4 258 IPR044847 GO:0000976|GO:0006355|GO:0010158
Lal21g0167 259 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 87 140 IPR006447 GO:0003677
Lal21g0167 259 PANTHER MYB-LIKE DNA-BINDING DOMAIN, SHAQKYF CLASS PROTEIN 4 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0167 Lal-Chr21 1121791 1123450 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lal21g0167 None None None
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g0167 21 1121791 1123450 Lal21g0167 21 1121791 1123450 ECH
Lal8g0611 8 4248791 4253307 Lal21g0167 21 1121791 1123450 PCT
Lal25g0567 25 4198004 4203025 Lal21g0167 21 1121791 1123450 PCT
Lal21g0167 21 1121791 1123450 Lal8g0611 8 4248791 4253307 PCT
Lal21g0167 21 1121791 1123450 Lal25g0567 25 4198004 4203025 PCT