Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0139 ATGTATCCCAACCATCAAGCCTTTTCTTCAGTGTCCTATGCAGACTTGTTATCTGGGAATAGTCCTCTGTTACCTCATAACTACAGTGAAGCACAAAATGAGGTGAAGTTTATCACAGCTATTGTTGATACAGTTACAATGCAATCTATTGATGGAAATGTTCCAAGGACACAAATGGGGATTGGAGATAATACTGAGCAAAATATACAGTGCCAGGGATTATCTCTTAGTCTAGGGACACTAATGCCTTCTACTGAATCATCTGTCCCTCCATTTCAGTACCACTATCCCAACAACACTGATCTCTCATCCATAATGACAGATCATGATCTTATCAAAAGGGAGGGTTTGTACAACCAGCACCCCTCAATGCAATCTGATCCATGCCTGCAGGGTTCATCAGGTTTTTCAAACAATGTCCTAAACTCCCAATACCTTAAGGCAGCACAGGAGTTACTCGATGAAACAGTTAATGTTCGAAATGCTTTGAGTTCGAATCAACCTCGAGTGGAGAAACAAGAAACCAATTTTCGTGGCATTGGATTAGATGGCTCCAAAGATTCTAATGGAAAATCTTCTGGCACTAATGGTTCTACAGCCAACCCTTCTTGTGAACTATCACCGGAAGAACGACATAATTTGTTGGACAAGAAGACAAAACTTTTGGCTATGCTGGATGAGGTAGACAGAAGATACCGACAATATTGCCATCAAATGCAGATTGTGATGTCATCTTTGGATATGGTTGCTGGTTGTGGAGCTGCTGAACCTTACACTACACTTGCTTTGAGAACAATTTCTCGCCACTTTCGGTGCTTGCGCGATGCTATCAGCAACCAAATTCAAATGACACAAAGGATCCTTGGGGAACAAGAAGGAATACCTCGTCTACGTTACGTGGATCAGAAGCTTAGACAGCAAAAGGCACTTCAGCAGCTTGGTGTAATGAGACAAACTTGGAGGCCTCAGAGGGGACTTCCTGAAACCTCTGTTTCAATACTCCGTGCTTGGCTCTTTGAGCATTTTCTTAATCCTTACCCCAAGGATTCAGAGAAAGTTATGCTAGCAAGGCAAACAGGCTTGTCCAGAAACCAGGTGGCAAATTGGTTCATCAATGCACGGGTGCGTCTTTGGAAGCCAATGGTTGAGGAAATGTACAAAGAAGAGTTTGGTGATTCAGAGATAAGCTGCAATGTTTCATCTGAAAATACTGTCTTAGCTAAAAGAGATGGTGTTCAAGCATCTGATAATAAATGGGAAGAGTCTCAGGACAATTTAGTAACTGTTGATGACAGTGTCCAACAAGGGCAACTTGATGGGTTGAAACCTTCTACTACAGAATTGAATAGAGGGATTTATGAAGGAGAAAATTTCAATGGCAACCAAAGCTTAGGCATGAATGATAATAACACTTTTTATTCAAGTGTACCTATCCCAACCAACCAGAATGGTGATGACAGTGTAATGACTTGTACTAATACTCCTGCTACATATGATTTATCTGAGTTGGGTAACTTTACTGTGGGTGGCCAAGTCTCTCTTGCATTGGAGTTAAGGAATTGTGAAAGTGATGGATTTGCTATGTCCAATGATGCCAGCAATAAGAGACATAATCGTCCTGAATTGGCTTCTTCGTCGGAGACTGATTTGCTAGATTATCATTTCACAGATTCAGGAAAGCAACAACACAGGTTTGGCAATCCTCATCTGTTGCATGATTTTGTCGTATGA 1731 0.4136 MYPNHQAFSSVSYADLLSGNSPLLPHNYSEAQNEVKFITAIVDTVTMQSIDGNVPRTQMGIGDNTEQNIQCQGLSLSLGTLMPSTESSVPPFQYHYPNNTDLSSIMTDHDLIKREGLYNQHPSMQSDPCLQGSSGFSNNVLNSQYLKAAQELLDETVNVRNALSSNQPRVEKQETNFRGIGLDGSKDSNGKSSGTNGSTANPSCELSPEERHNLLDKKTKLLAMLDEVDRRYRQYCHQMQIVMSSLDMVAGCGAAEPYTTLALRTISRHFRCLRDAISNQIQMTQRILGEQEGIPRLRYVDQKLRQQKALQQLGVMRQTWRPQRGLPETSVSILRAWLFEHFLNPYPKDSEKVMLARQTGLSRNQVANWFINARVRLWKPMVEEMYKEEFGDSEISCNVSSENTVLAKRDGVQASDNKWEESQDNLVTVDDSVQQGQLDGLKPSTTELNRGIYEGENFNGNQSLGMNDNNTFYSSVPIPTNQNGDDSVMTCTNTPATYDLSELGNFTVGGQVSLALELRNCESDGFAMSNDASNKRHNRPELASSSETDLLDYHFTDSGKQQHRFGNPHLLHDFVV 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0139 576 MobiDBLite consensus disorder prediction 164 208 - -
Lal21g0139 576 Gene3D - 316 394 - -
Lal21g0139 576 SUPERFAMILY Homeodomain-like 321 387 IPR009057 -
Lal21g0139 576 Pfam Homeobox KN domain 337 376 IPR008422 GO:0003677|GO:0006355
Lal21g0139 576 ProSiteProfiles 'Homeobox' domain profile. 317 380 IPR001356 GO:0003677
Lal21g0139 576 PANTHER BEL1-LIKE HOMEODOMAIN PROTEIN 10 25 535 - -
Lal21g0139 576 MobiDBLite consensus disorder prediction 186 206 - -
Lal21g0139 576 SMART HOX_1 320 384 IPR001356 GO:0003677
Lal21g0139 576 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 25 535 - -
Lal21g0139 576 SMART prehox3 134 279 IPR006563 -
Lal21g0139 576 CDD homeodomain 320 381 IPR001356 GO:0003677
Lal21g0139 576 Pfam Associated with HOX 140 278 IPR006563 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0139 Lal-Chr21 967093 971671 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Lal21g0139 POX 1.3e-47 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g0139 21 967093 971671 Lal21g0139 21 967093 971671 ECH
Lal25g0542 25 3957838 3963436 Lal21g0139 21 967093 971671 PCT
Lal10g0864 10 16157930 16162433 Lal21g0139 21 967093 971671 PCT