Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0130 ATGGCTGGGTTATTCTCTTTAGGTCAACAAAACAAAGAAGAAGAAGAAAATAATAACAACAGAAATAGTTTATTCTTGTTCAGGAACGAAGAGATCTACAACAAAGGGTTCGAGATATGGCCACAATCTTATCAGCACTACTCATCATTTGGGGTGGGTCCTAGTAGCAGGAACTCAAACGTTAATAACATTGTTGGTGACGAACACGTCTCGGTCTCTGATGAATCAACGAGATTTGGATTAATGGTAATGAGGTCAAGTGGAAGTAGCAGCAGCGGAATGAACTGTCAGGACTGTGGGAACCAAGCTAAGAAAGACTGTGCACATCTGAGATGCAGAACTTGTTGTAAGAGCCGAGGGTTTCAGTGCCCAACTCACATTAAGAGTACTTGGGTCCCCGCTGCTAAACGCCGTGAACGACAACAACAATTGCTCAGAGACACCGCTTCGAAACGACATCGAGAGCATCAAGGTTTACATTCTCCACCACCCGTCACAACCACAGGGTTGGAGCTGGGAGTACAATTTCCATCTGAAGTGAACTCAACAGCGGTGTTTAGATGTGTAAAAGTGACAGCAGTGGACACTCCAGAAGAGCAATATGCGTATCAAGCAGCTGTCAACATCGGAGGACATGTTTTCAAAGGAGTTCTCTATGATCAAGGACTTGAAGGTTCTTACACCAATATTGAGGGTTCATCTGGTGGTGGAGGTGAAGCTACTCAACAACAACTTGGTCTCATAACTTCAGCAACCACAGTCACAACCACTGGGAACCTATTTGACCCTTCTTCACTTTACCCTCCCCCAATCATGAATACTTTCATGGCTGGTACGCAATTTTTCCTACCCCCAAGATCCTAA 864 0.4456 MAGLFSLGQQNKEEEENNNNRNSLFLFRNEEIYNKGFEIWPQSYQHYSSFGVGPSSRNSNVNNIVGDEHVSVSDESTRFGLMVMRSSGSSSSGMNCQDCGNQAKKDCAHLRCRTCCKSRGFQCPTHIKSTWVPAAKRRERQQQLLRDTASKRHREHQGLHSPPPVTTTGLELGVQFPSEVNSTAVFRCVKVTAVDTPEEQYAYQAAVNIGGHVFKGVLYDQGLEGSYTNIEGSSGGGGEATQQQLGLITSATTVTTTGNLFDPSSLYPPPIMNTFMAGTQFFLPPRS 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0130 287 TIGRFAM LRP1_Cterm: LRP1 C-terminal domain 175 223 IPR006511 -
Lal21g0130 287 MobiDBLite consensus disorder prediction 148 168 - -
Lal21g0130 287 Pfam Domain of unknown function (DUF702) 93 224 - -
Lal21g0130 287 PANTHER PROTEIN SHI RELATED SEQUENCE 7 1 284 - -
Lal21g0130 287 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 1 284 IPR007818 GO:0003700|GO:0006355
Lal21g0130 287 TIGRFAM put_zinc_LRP1: putative zinc finger domain, LRP1 type 95 137 IPR006510 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0130 Lal-Chr21 904959 907545 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Lal21g0130 DUF702 1.4e-54 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g0130 21 904959 907545 Lal1g0204 1 1221889 1223522 ECH
Lal21g0130 21 904959 907545 Lal21g0130 21 904959 907545 ECH
Lal21g0130 21 904959 907545 Lal4g0084 4 507223 509833 LSH
Lal8g0554 8 3848411 3850205 Lal21g0130 21 904959 907545 PCT
Lal25g0538 25 3905058 3907407 Lal21g0130 21 904959 907545 PCT
Lal10g0869 10 16198212 16199850 Lal21g0130 21 904959 907545 PCT
Lal21g0130 21 904959 907545 Lal8g0554 8 3848411 3850205 PCT
Lal21g0130 21 904959 907545 Lal25g0538 25 3905058 3907407 PCT
Lal21g0130 21 904959 907545 Lal10g0869 10 16198212 16199850 PCT