Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g0126 ATGAATACCATTTTTCTATTTACCCTAATCTTTCACATTCTCCTCTTCATCACATTAACCCTTCCATCTTCAACAGCTTCCTCTGGATCCTGGCAGATCCTACATAACAGCATAGGTATTCCCGCCATGCACATGCAACTACTACACACCGATCATGTCGTCATGTTTGACCGCACAGACTTTGGCTTATCGAACTTATCCTTACCTAATGGCATGTGTCGCCACTTCAAAAACGGCAACGTTTCCAGAACAGATTGCACCGCTCATGCCATTGAGTACGATGTTGCATCCAACAAAGTCCGTGGGTTGTTCTTACAATCAGAGGTGTGGTGTTCTTCTGCATCGGTTATGGCTGATGGCATGCTAGTCCAAACTGGTGGGTTCAATGAAGGAGAGCGTAAGGTGAGAACCTACATTCCATGCTCAAATTCAAGTTGTGAGTGGAAAGAAATCGACGGTGGACTGAATGTGAAAAGATGGTATTCCACTAATCATGCGTTGCCAGATGGACGACAAATTATCATAGGAGGACAAGGGCAATTCAACTATGAGTTTTTCCCTAAGTCATCCAATGATAAGGATACTTATTCGTTACCTTTTTTGGTAGAAACCTATGATAAATTTGTTCAGAACAATCTTTATCCATTTGTTTTTCTTAACTTGGATGGTAACCTCTTCATTTTCGCTAATAATCGCGCTATTTTGTTCAATTACAAAAACAACACAGTAGTGAGGATATACCCTACAATCCCAGATGGTGGGAATCCAAGGTGTTATCCTAGTACTGGTTCAGCAGTGATGCTCCCATTAAAGAATTTGGAATCAAAAAATATTGAGGCTGAGGTTTTGATTTGTGGTGGGGCCCCTATAGGGTCTTGGCAACAAACAAGAGAGGGGCAATTTTGGGAAGCATTGAGGACATGCGCTAGGATTAAAATCACGGATCCAAATGCCATGTGGAAAATGGAGGACATGCCAAGAGGTAGGGTCATGAATGATATGGTGATGCTCCCAAACGGCAACGTTTTGATTATTAATGGAGCAGCTTTAGGTACAGCTGGATGGGAACAAGCAGTGAACCCTGTTTTGAATCCGTTTCTTTATAAACCAGAAAATGAAAATGGTTCACGATTCGAGGTGTTGAACCCTACAACTATTCCTAGAATGTATCACTCTTCCACCGTTTTGTTGCGTGATGGTAGAGTAATCGTAGGTGGAAGTAACCCTCACCAGTATTATGAATACAAAACCTCGTTTTATCCAACTGAGTTGAGTTTAGAGGCATTTTCCCCTCCATATTTGGATCCTATGTTTGCACCTCTAAGGCCGAAGATTTTGGAACCTTCTTCTCAAGCTAATCTCACATATGGTAAGTATTTCAGAATGAGTTTTCAGGTGAATGGGACACTTGTGACGGATTCAGTTTATGTTACAATGTTGGCACCACCTTTCAATACGCACTCTTTCTCCATGAATCAGAGGTTGTTGGTGTTGACCACAACTGAAGTCAATACTACAGGAAATTCTACTTATGAATTTAACGTGAGAACACCAATTTCATCTGTTCTTGCACCACTTGGGTTCTATATTATATTTGTGGTTCATCAAGAAATTCCAAGCGAGGGAATTTGGATTAGAATAAGTGATTGA 1650 0.4103 MNTIFLFTLIFHILLFITLTLPSSTASSGSWQILHNSIGIPAMHMQLLHTDHVVMFDRTDFGLSNLSLPNGMCRHFKNGNVSRTDCTAHAIEYDVASNKVRGLFLQSEVWCSSASVMADGMLVQTGGFNEGERKVRTYIPCSNSSCEWKEIDGGLNVKRWYSTNHALPDGRQIIIGGQGQFNYEFFPKSSNDKDTYSLPFLVETYDKFVQNNLYPFVFLNLDGNLFIFANNRAILFNYKNNTVVRIYPTIPDGGNPRCYPSTGSAVMLPLKNLESKNIEAEVLICGGAPIGSWQQTREGQFWEALRTCARIKITDPNAMWKMEDMPRGRVMNDMVMLPNGNVLIINGAALGTAGWEQAVNPVLNPFLYKPENENGSRFEVLNPTTIPRMYHSSTVLLRDGRVIVGGSNPHQYYEYKTSFYPTELSLEAFSPPYLDPMFAPLRPKILEPSSQANLTYGKYFRMSFQVNGTLVTDSVYVTMLAPPFNTHSFSMNQRLLVLTTTEVNTTGNSTYEFNVRTPISSVLAPLGFYIIFVVHQEIPSEGIWIRISD 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g0126 549 Pfam Glyoxal oxidase N-terminus 43 287 IPR009880 -
Lal21g0126 549 CDD E_set_GO_C 438 547 IPR015202 -
Lal21g0126 549 Gene3D - 25 437 IPR037293 -
Lal21g0126 549 Gene3D Immunoglobulins 441 549 IPR013783 -
Lal21g0126 549 PANTHER SECRETED PROTEIN-RELATED 19 547 - -
Lal21g0126 549 SUPERFAMILY Galactose oxidase, central domain 90 435 IPR011043 -
Lal21g0126 549 SUPERFAMILY E set domains 439 548 IPR014756 -
Lal21g0126 549 Pfam Galactose oxidase-like, Early set domain 442 547 IPR015202 -
Lal21g0126 549 PANTHER OXIDASE, PUTATIVE, EXPRESSED-RELATED 19 547 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g0126 Lal-Chr21 856499 858532 Dispersed/Proximal
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g0126 21 856499 858532 Lal21g0126 21 856499 858532 ECH
Lal17g0068 17 400265 401902 Lal21g0126 21 856499 858532 LSH
Lal21g0126 21 856499 858532 Lal4g0080 4 473023 474657 LSH
Lal8g0549 8 3792892 3798082 Lal21g0126 21 856499 858532 PCT