Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g1258 ATGGGGTTAAGGATTCAGAGATCATTTGCAACATTGTTCCTTGTCTTTTTCTTGGCTTTCAACATCTTTCTATTAAGGACTTCAATTTACCAAAAATCTACTTTTGGTTTTTTGGAGTCTTTTTTCAAAATCAAGAACCACAGTTCACTGTACTTCCCTCCTAATGGGTTTAGTCAAATTAAGGTCCTACAAGGACAACCTCAAAAGGGTAACACTACTCAAGGAAGAGATCAGAATATTTCAACAGTAGATCAAAAAGGGTACATAAATGTTCCATTGGTAAGTTCAACAAATGAAGAAAGTGTAATTTCAATCTCTAATGAAAAAGACAAATTCCATGATGGACTTTTGGTTTCTGAATTTGATGAAGCATCATGCATAAGCAGGTTCCAATCTCACTTATACCGCAAAGTTTCTCATCACAAACCTTCTCGATATCTGATATCGAAAGTGCGCAATTACGAGGAACTTCATAGAAGGTGTGGACCTAATACTATAGCTTATAACAAAAGCATGGCATACATTGAAAATTCTAAGAGCAACAATGGTGATGGTACAATGTGCAAATACATTGTTTGGTCTCCTACAAATGGCTTAGGGAACAGAATAATTAGCATGGCTGCAACATTTCTTTATGCTATTCTCACAAATAGAGTCCTACTTGTAAGATTTGGTAAAGATATTAGTGGCCTATTTTGTGAGCCATTTCTCAATTCAACTTGGATGTTACCAAATAACTCTCCATTTTGGAAGCAAGATCATATTGAAACATATGATAGCTTTTTAGAGAAGGGTAGAAGTAAAACCAACAAGACCAAAGAGGATTTACCTTCAGCTTTGTTTCTTTATCATCAATACACCAAAGAGGATCCTGAGAACTTTTTTCATTGTGATCATACTCAAGATCTTTTAAGGGATATCCCTTTGTTGATTATGCAAACAGATCAATATTTTGTCCCTTCTTTGTCAATGATCACTTCTTTCAACTTGGAGATTAACAAAATGTTCCCGGAAAAGGACACAATTTTCTACCATTTGGGACACTACCTTTTCCACCCTTCAAATGCGGCATGGGGACTAATCACCAGATTCTACAAAACATACTTAGCCAAAGCAGTTGAGAGAATTGGCCTTCAAATAAGAGTATTTGATCCTCAAGTTACAACACAGAAAGAAATTATGGACCTTGTTTTAAGCTGCACCATAAAGAATAAGATACTACCAAAATTAGATACACAAAATTCACTGTCTTATAGTAAAAACCATACTTTGAAAGCTGTTCTAGTGGCGTCGCTATATCCGGAGTATGGTCAGAATTTAAGGGCTATGTATCTGAATAAACCAAGTGTAAGTGGAGAGTTAATTGGAGTGTATCAACCAAGTCATGAAAAGCAACAAAAGTTTCATGATAACATGCATGATATGAAGGCATGGACAGAAATGTATCTACTAAGTTTATCTGATGTGTTAATAACTTCGTCTTTTTCAACTTTTGGGTATGTAGCTCAAGGTTTGGGAGGTTTGAAACCTTGGCTTCTTGTTAGGCCACACATGAAAAAACCAAATTCTCCATCTTGTGAACAAGACCTTTCATCAGAGCCTTGTTTTCATTTTGCTCCCATGCATCAGTGCAATGGAATGCCACAGAAACATTTTGCTTCATCTTTCCCTCATTTGTTGCAATGCAAGGATTTTAATAGAGGACTAAAGCTGGTTAGTGATTCTGCATTGTTGTAA 1737 0.3587 MGLRIQRSFATLFLVFFLAFNIFLLRTSIYQKSTFGFLESFFKIKNHSSLYFPPNGFSQIKVLQGQPQKGNTTQGRDQNISTVDQKGYINVPLVSSTNEESVISISNEKDKFHDGLLVSEFDEASCISRFQSHLYRKVSHHKPSRYLISKVRNYEELHRRCGPNTIAYNKSMAYIENSKSNNGDGTMCKYIVWSPTNGLGNRIISMAATFLYAILTNRVLLVRFGKDISGLFCEPFLNSTWMLPNNSPFWKQDHIETYDSFLEKGRSKTNKTKEDLPSALFLYHQYTKEDPENFFHCDHTQDLLRDIPLLIMQTDQYFVPSLSMITSFNLEINKMFPEKDTIFYHLGHYLFHPSNAAWGLITRFYKTYLAKAVERIGLQIRVFDPQVTTQKEIMDLVLSCTIKNKILPKLDTQNSLSYSKNHTLKAVLVASLYPEYGQNLRAMYLNKPSVSGELIGVYQPSHEKQQKFHDNMHDMKAWTEMYLLSLSDVLITSSFSTFGYVAQGLGGLKPWLLVRPHMKKPNSPSCEQDLSSEPCFHFAPMHQCNGMPQKHFASSFPHLLQCKDFNRGLKLVSDSALL 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g1258 578 Pfam Xyloglucan fucosyltransferase 105 544 IPR004938 GO:0008107|GO:0016020|GO:0042546
Lal20g1258 578 PANTHER FUCOSYLTRANSFERASE 2-RELATED 6 575 IPR004938 GO:0008107|GO:0016020|GO:0042546
Lal20g1258 578 Gene3D - 186 236 - -
Lal20g1258 578 PANTHER GALACTOSIDE 2-ALPHA-L-FUCOSYLTRANSFERASE-LIKE PROTEIN 6 575 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g1258 Lal-Chr20 17082880 17085391 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal20g1258 110 572 Xyloglucan Fucosyltransferase1 AT2G03220 49.356 1.41e-153 450
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal20g1258 K13681 - gmx:100809919 662.529