Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g1257 ATGGAGAAGATGGGGTTGAATTCCAATATACTCAAAACATTATTTGTTGTATGCTGCATAGTTTTCCCTTTTGCTCTCACTGCCACTTTAAAGTTCAGAAACTCAAGCATCACATTTTTTGAGGGGTTTTCTGAAAACAAGGTACTAGGAGGTGAAACATCTCAGAAAAATGTTACAACTAGAGGAAGTGTCCAAAATATAACACATGAAAATTCAGAGGTGTTGCAAGGAGAGATTCAAAATGATAGAGACCCTATTGAGGAAAGAACTACATCTAGGAATAACACAACACCAGAAATAGGATCAAAAAATGCTCCATTAATAAGTTCATCAAATAGTTCAAGTTCGGATTCAATTCATGACGACCAAGAAAAACTGCTAGATGGTCTTTTGGCTTTTGGATTTGATGAAGCATCATGTATAAGCAGGTTACAGTCTCACTTATACCGCAAAGTTTCTCCTCACAAACCTTCTCGATATCTGATATTGAAACTGCGCAATTACGAGGAACTTCATAGAAGGTGTGGACCTGATAGTATAGCTTATAACAAAAGCATGGCATACATTGAGCATCCTAAGGACAATAATGGTGATGGTACAATGTGCAAATACCTTGTTTGGTCACCAGCTAATGGCTTAGGGAACAGAATAATTAGCATGGCTGCAACATTTCTATATGCTATTCTCACAGATAGAGTTCTACTTGTAAGATTTGGTGAAGATATGCATAGCTTATTTTGTGAGCCATTTCTCAATTCAACTTGGATGTTACCAACCAACTCTCCTTTATGGAATCAAGAACATGTTGAAACATATGACAGCTTTTTAGAGAAGGACAAGGCCAACAATTCGAAACACGACTTACCATCGGCTTTGTTTCTAAATCATCAATTCACCAAAGAGAATCCTGAGAAATTTTTCCATTGTGGTCATAATCAAGATCTTCTAAGGAATGTTCCTTTGTTGATTTCGCAGACAGATCAATATTTTGTCCCTTCTTTGTTCATGATTCCATCTTTCAACTTGGAGATTAACAAAATGTTCCCACAAAAGGACACAGTTTTCTACCATTTGGCACACTACCTTTACCACCCTTCAAATGAGGCATGGAGACTAATCACAACATTCTATCCAACATACTTGGCGAAAGTCGACGAGAGGATCGGCATTCAGATAAGAGTTTTTAGACCTGATATCACATCAAATCAAGCAATTATGGACTTAGTTTTAAGCTGCACCATAGAGAATAAACTTCTACCAAAATTAGATACACAAAATTCAGTTTCTTATAGTCAAAACCATACTATAAAGGCAGTTCTAGTGACATCTTTGTCTCCAAATTATGGTGAGAATTTGAGGGCTATGTATGAGAATAAACAAAGTATTAGTGGAGAAGTAATTGAAGTTTATCAACCAAGTCATGAAGAGAAACAAAAGTTTGGTGATAACATGCATAATATGAAGGCATGGACAGAAATGTATTTACTAAGTTTATCTGATGTATTGGTTACTTCATCTTTATCAACTTTTGGGTATGTGGCTCAAGGTATGGGAGGTTTGAAGCCTTGGATTCTTGTTAAACCTCACAAGAAAAAACCCAATTCTGCATCATGTAAGCAAGACTTTTCATCAGAGCCTTGTTTTCATTACCCTCCTATGCATGAGTGCAATGGAAAGTTCCAAAAACATTTTTCTTCTTCTTTCCCTCATTTGTGGGAATGCAAGGATCGTCACAGTGGACTCAAGCTGGTTAGTGAACAGAGATCTGTTGTGTCAAGACCTGTCACGGCCAATAAAAATATGAAAAAATTAAAGTTGTCACAGACCCTACTGAAGGAAGAACTAGACATAAATATCATAGCATCAGAAAAGGCTGCATAG 1881 0.3668 MEKMGLNSNILKTLFVVCCIVFPFALTATLKFRNSSITFFEGFSENKVLGGETSQKNVTTRGSVQNITHENSEVLQGEIQNDRDPIEERTTSRNNTTPEIGSKNAPLISSSNSSSSDSIHDDQEKLLDGLLAFGFDEASCISRLQSHLYRKVSPHKPSRYLILKLRNYEELHRRCGPDSIAYNKSMAYIEHPKDNNGDGTMCKYLVWSPANGLGNRIISMAATFLYAILTDRVLLVRFGEDMHSLFCEPFLNSTWMLPTNSPLWNQEHVETYDSFLEKDKANNSKHDLPSALFLNHQFTKENPEKFFHCGHNQDLLRNVPLLISQTDQYFVPSLFMIPSFNLEINKMFPQKDTVFYHLAHYLYHPSNEAWRLITTFYPTYLAKVDERIGIQIRVFRPDITSNQAIMDLVLSCTIENKLLPKLDTQNSVSYSQNHTIKAVLVTSLSPNYGENLRAMYENKQSISGEVIEVYQPSHEEKQKFGDNMHNMKAWTEMYLLSLSDVLVTSSLSTFGYVAQGMGGLKPWILVKPHKKKPNSASCKQDFSSEPCFHYPPMHECNGKFQKHFSSSFPHLWECKDRHSGLKLVSEQRSVVSRPVTANKNMKKLKLSQTLLKEELDINIIASEKAA 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g1257 626 Gene3D - 200 283 - -
Lal20g1257 626 PANTHER FUCOSYLTRANSFERASE 2-RELATED 8 586 IPR004938 GO:0008107|GO:0016020|GO:0042546
Lal20g1257 626 MobiDBLite consensus disorder prediction 70 120 - -
Lal20g1257 626 PANTHER GALACTOSIDE 2-ALPHA-L-FUCOSYLTRANSFERASE-LIKE PROTEIN 8 586 - -
Lal20g1257 626 MobiDBLite consensus disorder prediction 91 117 - -
Lal20g1257 626 MobiDBLite consensus disorder prediction 76 90 - -
Lal20g1257 626 Pfam Xyloglucan fucosyltransferase 115 556 IPR004938 GO:0008107|GO:0016020|GO:0042546
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g1257 Lal-Chr20 17079518 17082327 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal20g1257 122 584 Xyloglucan Fucosyltransferase1 AT2G03220 50.638 2.53e-156 459
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal20g1257 K13681 - gmx:100818288 674.855
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal20g1257 20 17079518 17082327 Lal1g1214 1 13385449 13388148 LSH
Lal20g1257 20 17079518 17082327 Lal18g0034 18 226284 229027 LSH
Lal25g0019 25 150581 156709 Lal20g1257 20 17079518 17082327 PCT
Lal20g1257 20 17079518 17082327 Lal25g0019 25 150581 156709 PCT