Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g0779 ATGGCTACCCTTATTGCTCCCAGCCACTATTCCCCTGTTGAAGATGCAGAAGCTCTCCAAAAATCTTTCAAAGGATGGGGTGCTGATGATAAGGCCATTATAGCAATACTAGGCCATAGAAATTTTGATCAGAGGCAGAAAATCAGAAAAGCTTACGAGGAACTTTTCCAAGAGGATCTCATCAAACGCCTTGAGTCTGAGATATCCGGTGACTTTGAGAGAGCTGTGTATCGCTGGATGTTGGAACCTGCAGACCGTGATGCTGTTTTGGCCAATGTGGCAATCAAGAATGGCAGCAAAGACTATCATGTTGTGGTGGAAATTGCTACTGTCCTGTCAGCTGAAGAGCTCTTGGCTGTGAGGCGTGCCTATCACAACCGCTACAAGCGTTCCTTGGAAGAAGATGTGGCAGCTAATACCACCGGCCATCTTCGCCAGGCAAGACATTCTCTATTGTCCCTCAAGGTTTGTGTTTGCGAGTTGAATTTTGAAAAGTTTTTGGTTGGATTGGTGAGCTCATTTAGGTACGAGGGTGATGAGATCAATGCAAAATTGGCAAAAACAGAAGCAAACATTCTTCATGAATCTGTGAGGGAGAAGAAAGAAAACTATGAAGAAGTCATCAGGATCCTTACTACCAGGAGCAAGACTCAACTTGTGGCAACTTTCAATTATTACAAAGATGAGCATGCCATTTCCATCAGTAAGAAATTGTTGGATCAAACATCTGATGACTTCCACAAAGCATTGCACACAGCTATTCGCTGCATCAATGATCATAAGAAGTACTATGAAAAGGTTCTGCGAAATGCTATCAAAAAACTTGGAACCGATGAGGACGGACTGAGCCGCGTGGTGGTCACGAGAGCTGAGAAGGATTTGAAGGACATCAAAGAGCTCTACTACAGGAGAAACAGTGTTCACCTTGAGGATGCAGTGGCCAAGGATATCTCAGGAGACTACAAGAAGTTCATTCTCACTCTCTTGGGAAAACAAGACTAA 1002 0.4391 MATLIAPSHYSPVEDAEALQKSFKGWGADDKAIIAILGHRNFDQRQKIRKAYEELFQEDLIKRLESEISGDFERAVYRWMLEPADRDAVLANVAIKNGSKDYHVVVEIATVLSAEELLAVRRAYHNRYKRSLEEDVAANTTGHLRQARHSLLSLKVCVCELNFEKFLVGLVSSFRYEGDEINAKLAKTEANILHESVREKKENYEEVIRILTTRSKTQLVATFNYYKDEHAISISKKLLDQTSDDFHKALHTAIRCINDHKKYYEKVLRNAIKKLGTDEDGLSRVVVTRAEKDLKDIKELYYRRNSVHLEDAVAKDISGDYKKFILTLLGKQD 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g0779 333 Pfam Annexin 190 251 IPR018502 GO:0005509|GO:0005544
Lal20g0779 333 Pfam Annexin 266 328 IPR018502 GO:0005509|GO:0005544
Lal20g0779 333 Pfam Annexin 15 76 IPR018502 GO:0005509|GO:0005544
Lal20g0779 333 Pfam Annexin 87 147 IPR018502 GO:0005509|GO:0005544
Lal20g0779 333 PANTHER ANNEXIN 8 333 - -
Lal20g0779 333 Coils Coil 194 214 - -
Lal20g0779 333 SUPERFAMILY Annexin 3 331 IPR037104 GO:0005509|GO:0005544
Lal20g0779 333 Gene3D Annexin 184 258 IPR037104 GO:0005509|GO:0005544
Lal20g0779 333 ProSiteProfiles Annexin repeat profile. 82 153 IPR018502 GO:0005509|GO:0005544
Lal20g0779 333 ProSiteProfiles Annexin repeat profile. 259 330 IPR018502 GO:0005509|GO:0005544
Lal20g0779 333 PANTHER ANNEXIN 8 333 - -
Lal20g0779 333 ProSitePatterns Annexin repeat signature. 276 328 IPR018252 GO:0005509|GO:0005544
Lal20g0779 333 Gene3D Annexin 2 81 IPR037104 GO:0005509|GO:0005544
Lal20g0779 333 PRINTS Annexin family signature 24 46 IPR001464 GO:0005509|GO:0005544
Lal20g0779 333 PRINTS Annexin family signature 64 80 IPR001464 GO:0005509|GO:0005544
Lal20g0779 333 PRINTS Annexin family signature 91 112 IPR001464 GO:0005509|GO:0005544
Lal20g0779 333 PRINTS Annexin family signature 272 292 IPR001464 GO:0005509|GO:0005544
Lal20g0779 333 PRINTS Annexin family signature 316 329 IPR001464 GO:0005509|GO:0005544
Lal20g0779 333 ProSiteProfiles Annexin repeat profile. 184 255 IPR018502 GO:0005509|GO:0005544
Lal20g0779 333 Gene3D Annexin 82 152 IPR037104 GO:0005509|GO:0005544
Lal20g0779 333 SMART annex3 27 79 IPR018502 GO:0005509|GO:0005544
Lal20g0779 333 SMART annex3 203 253 IPR018502 GO:0005509|GO:0005544
Lal20g0779 333 SMART annex3 99 154 IPR018502 GO:0005509|GO:0005544
Lal20g0779 333 SMART annex3 276 328 IPR018502 GO:0005509|GO:0005544
Lal20g0779 333 Gene3D Annexin 261 331 IPR037104 GO:0005509|GO:0005544
Lal20g0779 333 ProSiteProfiles Annexin repeat profile. 10 81 IPR018502 GO:0005509|GO:0005544
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g0779 Lal-Chr20 8345508 8349024 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal20g0779 20 8345508 8349024 Lal2g0763 2 4894868 4896914 PCT
Lal20g0779 20 8345508 8349024 Lal9g0671 9 4625461 4627435 PCT
Lal2g0763 2 4894868 4896914 Lal20g0779 20 8345508 8349024 PCT
Lal9g0671 9 4625461 4627435 Lal20g0779 20 8345508 8349024 PCT