Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g0646 ATGGCTTTAGGGCCAGTGGAACTTGCTTCTGCAGGAGCTTCCATTGCTTTGTTTAACCAAGCTTTGAAAATTAGTGTAGCCCCTTTGGTTAGTATTACAACTTCCTTTGTTGCTGAGGAAGATACTATGGAAAAAATCAATACCATAGCAGCTGAAAAACACTTCAACGAAAGCGTCAAGGCCGAATCGAACCAAGTAACTTCCAATGATCACTTGCCTCAAGACATCAAATTAGAAAATAGTGAGACTCCAACAGAAGATTTTGCTGCAAATGTTGAAAAGAATGATGCTTTTGCTGTACCTCAGAATGTTGATAAGGAAAGTACTTTGAGAAGTGAGAAAAATAATGAAGATGGAAACAAGAAGAGGCACCTTGCTTCGGGTTCAACGGCACTACTTTTTGGCACAATCCTTGGCCTTCTTCAAGCTACAATCCTTATATCTGCAGCCAAACCTTTATTAGGTGTTATTGGTCTAAAACATAGTTTCTTCATTAACAAAGGTTCTCCTATGTTATTACCAGCAATAAAGTACTTGAGATTGAGAGCTTTAGGTTCTCCTGCAGTGCTTCTGTTCCTTGTCATGCAAGGAATCTTTCGCGGGTTCAAGGATACTAAAACTCCTTTATATGTCATAGGAGGTCTTGTGTTGGCGCGAATAGTAGCAGCGACATTCTGTGTGACTTTGTCGGCGTCATTTGCAGCACGGTTAGGTCCAATTGAAATGGCTGCATTTCAAACATGCCTGCAGGTTTGGTTGACATCATCTCTTCTGGCAGACGGTTTGGCTGTTGCCGGACAGGCAATTCTAGCTTGTTCCTTTGCTGAGAAAGACTATGAAAAGTTAACTGCTGCTTCAGCAAGGACAGTGCAATTTGGTATTGTTCTAGGACTAGGACTATCTCTTGTTGTCGGAATTGGATTATACTTTGGAGCTGGAATCTTTTCCAAAAGCATTCTTGTTGTGAATTTAATCCGAATAGTCGTTCCGGTCATAGTGTCATCACTAAGTGTTGCTCCATTATTCCTTCTTTACAAGAGATATGGTTTTATTGGGATCTGGATTGGATTAACCATCTATATGAGTCTTCGCATGTTTGCTGGTGTATGGAGGATAGGAACAGGAACAGGACCATGGCGATTCCTGAGAGAGGCAAGATTGTGTTCATGA 1170 0.4111 MALGPVELASAGASIALFNQALKISVAPLVSITTSFVAEEDTMEKINTIAAEKHFNESVKAESNQVTSNDHLPQDIKLENSETPTEDFAANVEKNDAFAVPQNVDKESTLRSEKNNEDGNKKRHLASGSTALLFGTILGLLQATILISAAKPLLGVIGLKHSFFINKGSPMLLPAIKYLRLRALGSPAVLLFLVMQGIFRGFKDTKTPLYVIGGLVLARIVAATFCVTLSASFAARLGPIEMAAFQTCLQVWLTSSLLADGLAVAGQAILACSFAEKDYEKLTAASARTVQFGIVLGLGLSLVVGIGLYFGAGIFSKSILVVNLIRIVVPVIVSSLSVAPLFLLYKRYGFIGIWIGLTIYMSLRMFAGVWRIGTGTGPWRFLREARLCS 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g0646 389 Pfam MatE 121 221 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Lal20g0646 389 Pfam MatE 224 345 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Lal20g0646 389 PANTHER PROTEIN DETOXIFICATION 44, CHLOROPLASTIC-RELATED 213 334 IPR044644 -
Lal20g0646 389 PANTHER PROTEIN DETOXIFICATION 44, CHLOROPLASTIC-RELATED 3 212 IPR044644 -
Lal20g0646 389 PANTHER PROTEIN DETOXIFICATION 44, CHLOROPLASTIC-RELATED 331 383 IPR044644 -
Lal20g0646 389 PANTHER PROTEIN DETOXIFICATION 43 213 334 - -
Lal20g0646 389 PANTHER PROTEIN DETOXIFICATION 43 3 212 - -
Lal20g0646 389 PANTHER PROTEIN DETOXIFICATION 43 331 383 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g0646 Lal-Chr20 5957702 5961718 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal20g0646 20 5957702 5961718 Lal20g0646 20 5957702 5961718 ECH
Lal2g0878 2 5708591 5713055 Lal20g0646 20 5957702 5961718 PCT