Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g0539 ATGAAGTATGTGTTGGTCACAGGTGGTGTTGTTAGTGGACTTGGGAAAGGTGTCACTGCTAGCAGTATTGGGGTTCTACTTAAGGCATGTGGTCTTAGAGTTACTTCTACCAAGATTGATCCGTATCTGAACACTGATGCAGGGACTATGTCTCCTTTTGAGCATGGGGAGGTGTTTGTCTTAGACGATGGCGGAGAGGTTGACCTTGACCTTGGAAACTATGAACGTTTCTTGGACGTCAAATTAACCCGTGATAATAATATCACTACCGGAAAAATATATCAGTCTGTTATTGAGAAGGAGAGAAGAGGTGATTATCTTGGAAAGACTGTTCAGGTTGTTCCACACATAACAGATGCCATCCAAGACTGGATCGAGCGTGTTGCACGGATACCAGTTGACGGAAAAGAAGGGCCAGCTGATGTTTGTGTCATTGAATTGGGTGGAACTATAGGGGATATTGAGTCTATGCCTTTTATTGAAGCACTTGGCCAATTTTCATACCGTGTAGGCCCCGGCAATTTCTGTTTGATTCATGTTAGCCTGGTTCCTGTACTCAATGTTGTTGGTGAACAGAAAACAAAGCCAACTCAGCACAGTGTTCGACAACTTAGAGGATTAGGTTTGACCCCTAATCTTCTTGCTTGTCGAAGCACAAAGGAACTTGATGACAATGTTAAGTCAAAACTTGCTCAATTTTGTCATGTGCCGTTGTCAAACATAGTTACTCTTCATGATGTTCCAAATATTTGGCACATTCCTTTGCTATTAAAAGAGCAGAAAGCGCATGAGGCGATCCTGAAAGCTCTAAACCTGTTAAGTATTACTAAAGAGCCTAATTTGAAGGAATGGACCACCAGGACAAAAGTTTATGTCGACTTTCATGAAAATGTTAGAATTGCGATGGTAGGAAAATACACTGGCCTTTCTGATGCATATCTTTCTGTTCTGAAGGCACTTTTACATGCTGCTGTTGCACGTAATCGAAAACTTATTGTGGACTGGGTTCCTGCTGAAGATCTTGAAGATGTTACTTCTAAACAGGATCCTAATGCATACAAAGCCGCTTGGGGACTTCTGAAGGGTGCTTATGGGGTTCTAGTTCCAGGAGGTTTTGGTGACCGAGGAGTGCAAGGGAAAATTCTGGCTGCAAAGTATGCTCGAGAGAATAATGTCCCATATCTTGGCATTTGCTTGGGAATGCAAATTGCTGTCATTGAGTTTGCCCGATCTATCCTCGGTATGGGTGATACTACCAGCACAGAATTTGATCCCGAGGCGAAGAACCCTTGTGTCGTATTCATGCCAGAGGGTTCAAAGACTCATATGGGAGGAACCATGCGTCTGGGTTCAAGGAGAACTTACTTCCAAGTTGCTGACTGCAAATCTGCTAAGTTGTATGGTAATGTAAGCTTTGTTGATGAGCGACATCGGCATAGATATGAGGTTAACCCTGACATGATATCACAGCTAGAGAGTGCTGGTCTATCTTTTGTTGGCAAAGATGAAACTGGGAGTCGTATGGAGATAGTTGAACTGCCTAGCCATCCTTTTTTTATTGGCGTGCAATTTCACCCGGAGTTCAAGTCCAGACCGGGGAAACCTTCTCCTCTCTTCTCAGGATTAATTGCAGCAGCATGTGAACTGGATAGGACAGTTATGTCACCAAGCCATGGCCACACCAAGTTAACTAATGGAATACAAAATGGACACTCACCAATACTGAAATCACACCAAAATGGGAATGGCTTCAAAACAACCAACGGTTCCTTAAACGGTATATACACGAATGGCAACGCCAACGGCAATGGCAATGGCAATGGCGTGCACTTTTAG 1836 0.4346 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTSTKIDPYLNTDAGTMSPFEHGEVFVLDDGGEVDLDLGNYERFLDVKLTRDNNITTGKIYQSVIEKERRGDYLGKTVQVVPHITDAIQDWIERVARIPVDGKEGPADVCVIELGGTIGDIESMPFIEALGQFSYRVGPGNFCLIHVSLVPVLNVVGEQKTKPTQHSVRQLRGLGLTPNLLACRSTKELDDNVKSKLAQFCHVPLSNIVTLHDVPNIWHIPLLLKEQKAHEAILKALNLLSITKEPNLKEWTTRTKVYVDFHENVRIAMVGKYTGLSDAYLSVLKALLHAAVARNRKLIVDWVPAEDLEDVTSKQDPNAYKAAWGLLKGAYGVLVPGGFGDRGVQGKILAAKYARENNVPYLGICLGMQIAVIEFARSILGMGDTTSTEFDPEAKNPCVVFMPEGSKTHMGGTMRLGSRRTYFQVADCKSAKLYGNVSFVDERHRHRYEVNPDMISQLESAGLSFVGKDETGSRMEIVELPSHPFFIGVQFHPEFKSRPGKPSPLFSGLIAAACELDRTVMSPSHGHTKLTNGIQNGHSPILKSHQNGNGFKTTNGSLNGIYTNGNANGNGNGNGVHF 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g0539 611 Pfam Glutamine amidotransferase class-I 309 544 IPR017926 -
Lal20g0539 611 Gene3D - 1 291 IPR027417 -
Lal20g0539 611 PANTHER CTP SYNTHASE 1 575 - -
Lal20g0539 611 CDD CTPS_N 2 268 IPR017456 GO:0003883|GO:0006221
Lal20g0539 611 Pfam CTP synthase N-terminus 2 272 IPR017456 GO:0003883|GO:0006221
Lal20g0539 611 SUPERFAMILY Class I glutamine amidotransferase-like 297 549 IPR029062 -
Lal20g0539 611 TIGRFAM PyrG: CTP synthase 1 545 IPR004468 GO:0003883|GO:0006221
Lal20g0539 611 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 272 IPR027417 -
Lal20g0539 611 PANTHER CTP SYNTHASE 1 575 IPR004468 GO:0003883|GO:0006221
Lal20g0539 611 Gene3D - 294 558 IPR029062 -
Lal20g0539 611 ProSiteProfiles Glutamine amidotransferase type 1 domain profile. 299 552 - -
Lal20g0539 611 Hamap CTP synthase [pyrG]. 1 550 IPR004468 GO:0003883|GO:0006221
Lal20g0539 611 CDD GATase1_CTP_Synthase 298 543 IPR033828 GO:0003883|GO:0006241
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g0539 Lal-Chr20 4720042 4727866 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal20g0539 20 4720042 4727866 Lal20g0539 20 4720042 4727866 ECH