Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g0506 ATGGAAACAAGCAGAGTAAGAATGAGAAATGGGATATTTTTCCTCTACTTCACTTTTGCTGTTATTTCTCTCAATCATTGTGATGCTGATAGATCAATGAAACTATTGAGAGGCCCTAAACTTAGAAGAAATATAATCAACAAGAACCCAAAAAAGTTGAAAATTATAAAACATTTTAATCTTCCATCTTTATTTTCAACAAATGAACAACCCTATAGTATTAGTTCCCCATTAACTATGACTCCTTATGAATCACTACCTCCAAATTCATTATTAGAAAACAACTCTCCATATTGTGAGTATCCACCACCAAGTACTCCTTCTACCACAAGCTCTCAACCATCTACACCATCATCAATTTTTCCAACCCAAAGCCCACCTCCAAGCCCAATAACCATAATACCAGGCCCACCTGGATCTTTATCAACACCAACCCCAGGCATTGATGTAAGCCCACCAAGTACTATCACACCCGGCTCGCCTAACCCGGTACTGAATCCTCCGGTCTTTGAGCCAGGCCCACCCGAGACAACTATGAGACCGCCATACTTTGAGCCCAGCCCACCATTCTACATTCCTTCCCCTACGCCAAACCCGATACTGAATCCTCCCATCATTGAGCCAGGCCCGCCCGAGACAACAATGAGCCCACCATATTCTGAGCCCAACCCACCATTAAACATTCCTTCCCCTACTAGTGCCATCATTCCAGGCCCACCCATTACTTTTCCATCCCCAATAGGAGGTGGCATTGTTCCAAGTCCAACAGTATTTCAACCACCTATTGTCTACCCACCACCAAGTGTACCGCCGCCACGGAATGCTGCTCCGAGCACCACCTTGTTGTGGTGTGTGGCTAAGCCATCAGTCCCAGACCCAATCATTCAAGAGGCCATGAACTATGCTTGTGATTCGGGAGCCGAATGTGATTCGATATTGCCCAATGGGCCTTGTTTTGAGCCCAATTCTGTATATGCACATGCTTCCTATGCTTTCAATAGTTATTGGCAAAAGACTAAGGCTGCTGGTGGCACTTGTGAGTTTGGAGGAACAGCCATATTGGTTTCAATTGATCCTAGTGAGTCCTTCAATCTAGACAAAGATTTGTATTCTCCATCTTATCACAAAACCTTACGGATTTCTTTATGA 1149 0.4413 METSRVRMRNGIFFLYFTFAVISLNHCDADRSMKLLRGPKLRRNIINKNPKKLKIIKHFNLPSLFSTNEQPYSISSPLTMTPYESLPPNSLLENNSPYCEYPPPSTPSTTSSQPSTPSSIFPTQSPPPSPITIIPGPPGSLSTPTPGIDVSPPSTITPGSPNPVLNPPVFEPGPPETTMRPPYFEPSPPFYIPSPTPNPILNPPIIEPGPPETTMSPPYSEPNPPLNIPSPTSAIIPGPPITFPSPIGGGIVPSPTVFQPPIVYPPPSVPPPRNAAPSTTLLWCVAKPSVPDPIIQEAMNYACDSGAECDSILPNGPCFEPNSVYAHASYAFNSYWQKTKAAGGTCEFGGTAILVSIDPSESFNLDKDLYSPSYHKTLRISL 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g0506 382 MobiDBLite consensus disorder prediction 120 142 - -
Lal20g0506 382 PANTHER CARBOHYDRATE-BINDING X8 DOMAIN SUPERFAMILY PROTEIN 11 211 - -
Lal20g0506 382 PANTHER CARBOHYDRATE-BINDING X8 DOMAIN SUPERFAMILY PROTEIN 207 360 - -
Lal20g0506 382 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 11 211 IPR044965 GO:0004553|GO:0005975
Lal20g0506 382 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 207 360 IPR044965 GO:0004553|GO:0005975
Lal20g0506 382 SMART X8_cls 282 365 IPR012946 -
Lal20g0506 382 MobiDBLite consensus disorder prediction 156 240 - -
Lal20g0506 382 Gene3D - 278 372 - -
Lal20g0506 382 PRINTS Proline rich extensin signature 75 87 - -
Lal20g0506 382 PRINTS Proline rich extensin signature 110 131 - -
Lal20g0506 382 PRINTS Proline rich extensin signature 131 147 - -
Lal20g0506 382 PRINTS Proline rich extensin signature 150 167 - -
Lal20g0506 382 PRINTS Proline rich extensin signature 177 202 - -
Lal20g0506 382 MobiDBLite consensus disorder prediction 85 240 - -
Lal20g0506 382 Pfam X8 domain 282 352 IPR012946 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g0506 Lal-Chr20 4321581 4324633 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal20g0506 20 4321581 4324633 Lal20g0506 20 4321581 4324633 ECH