Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g0495 ATGGCCTCAGCAGCATCACACACCACTTTCTCTCTCCTCCGTTCCACCACCACCACCTCGTCCACCCCTTCCACCCGCTCCTCCCTCATCCACCTCCCCACCACCACCACCGCCTCATCCCTCCGCCTCCGACCCATCCGCCGCCTGGGCTTCTCCGCCGCGGACCCACTACTGGCCGTCCACGTGGCAACCAGGGCAGGGACAATTAAGGGAAAGGGAACAAGAGGGGTGGTTTCAATGGCGAAGAAGAGTGTTGGGGATTTGAGTTCAAGTGATTTGAAAGGGAAGAGAGTGTTTGTGAGAGCTGATCTTAATGTTCCACTTGATGATAATCAGAACATTACTGATGATACTAGAATTCGTGCTGCTATTCCTACTATTAAGCATCTTATTCAAAATGGTGCTAAAGTTATTCTCTCTACTCACTTGGGAAGGCCAAAGGGTGTCACTCCCAAGTACAGCTTAGCACCTCTTGTACCTCGGCTTTCTGAACTCATCGGCATTCAGGTTGTCAAGGCTGAGGACAGTATTGGTCCAGAAGTTGAAAAACTGGTAGCTTCCCTTCCGGATGGAGGTGTTCTCCTTCTAGAGAATGTGAGGTTTTACAAGGAGGAAGAGAAGAATGACCCGGAGCATGCTAAAAAGCTTGCAGCTCTAGCCGATCTTTATGTGAATGATGCATTTGGTACTGCTCATAGGGCACATGCATCAACCGAAGGGGTCACTAAATTCCTGAAACCATCTGTTGCTGGTTTTCTTTTGCAAAAGGAACTTGACTACCTTGTCGGGGCAGTATCAAGCCCAAAAAGGCCATTTGCTGCCATTGTCGGTGGTTCCAAGGTCTCATCCAAAATTGGAGTGATTGAATCACTTCTAGAAAAAGTTGACATCCTTCTTCTTGGTGGAGGGATGATCTTCACATTTTACAAGGCCCAAGGTATCTCAGTGGGTTCATCCCTTGTAGAGGAAGATAAGTTGGATCTTGCTACAACACTAATAGCAAAAGCCAAAGCGAAGGGGGTTTCTCTCTTATTACCAAGTGATGTGGTGATTGCCGACAAATTTGCTCCTGATGCAAACAGCAAGGTTGTCCCAGCAACTGCCATCCCCGATGGCTGGATGGGATTGGATATTGGTCCAGATTCTATTAAAACATTCAATGAGGCATTGGACACTACCAAAACCATCATATGGAATGGACCTATGGGTGTGTTCGAGTTTGACAAGTTTGCCGTTGGGACAGAGGCTATTGCAAAGAAGCTAGCTGACCTTAGCGGAAAAGGGGTGACAACAATTATCGGAGGAGGAGATTCAGTTGCAGCGGTGGAGAAAGTAGGAGTTGCGAGCGTCATGAGCCACATATCAACCGGTGGTGGCGCTAGTTTGGAGTTATTGGAAGGCAAAGAGCTTCCTGGTGTCCTTGCTCTTGATGAAGCCACACCAGTTGCTGTGTAA 1455 0.4825 MASAASHTTFSLLRSTTTTSSTPSTRSSLIHLPTTTTASSLRLRPIRRLGFSAADPLLAVHVATRAGTIKGKGTRGVVSMAKKSVGDLSSSDLKGKRVFVRADLNVPLDDNQNITDDTRIRAAIPTIKHLIQNGAKVILSTHLGRPKGVTPKYSLAPLVPRLSELIGIQVVKAEDSIGPEVEKLVASLPDGGVLLLENVRFYKEEEKNDPEHAKKLAALADLYVNDAFGTAHRAHASTEGVTKFLKPSVAGFLLQKELDYLVGAVSSPKRPFAAIVGGSKVSSKIGVIESLLEKVDILLLGGGMIFTFYKAQGISVGSSLVEEDKLDLATTLIAKAKAKGVSLLLPSDVVIADKFAPDANSKVVPATAIPDGWMGLDIGPDSIKTFNEALDTTKTIIWNGPMGVFEFDKFAVGTEAIAKKLADLSGKGVTTIIGGGDSVAAVEKVGVASVMSHISTGGGASLELLEGKELPGVLALDEATPVAV 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g0495 484 Gene3D - 153 479 IPR015824 GO:0004618|GO:0006096
Lal20g0495 484 Gene3D - 67 151 IPR015824 GO:0004618|GO:0006096
Lal20g0495 484 PRINTS Phosphoglycerate kinase family signature 92 108 IPR001576 GO:0004618|GO:0006096
Lal20g0495 484 PRINTS Phosphoglycerate kinase family signature 114 136 IPR001576 GO:0004618|GO:0006096
Lal20g0495 484 PRINTS Phosphoglycerate kinase family signature 191 206 IPR001576 GO:0004618|GO:0006096
Lal20g0495 484 PRINTS Phosphoglycerate kinase family signature 219 241 IPR001576 GO:0004618|GO:0006096
Lal20g0495 484 PRINTS Phosphoglycerate kinase family signature 250 272 IPR001576 GO:0004618|GO:0006096
Lal20g0495 484 PRINTS Phosphoglycerate kinase family signature 273 292 IPR001576 GO:0004618|GO:0006096
Lal20g0495 484 PRINTS Phosphoglycerate kinase family signature 395 420 IPR001576 GO:0004618|GO:0006096
Lal20g0495 484 PRINTS Phosphoglycerate kinase family signature 431 442 IPR001576 GO:0004618|GO:0006096
Lal20g0495 484 PRINTS Phosphoglycerate kinase family signature 454 471 IPR001576 GO:0004618|GO:0006096
Lal20g0495 484 ProSitePatterns Phosphoglycerate kinase signature. 97 107 IPR015911 GO:0004618|GO:0006096
Lal20g0495 484 Pfam Phosphoglycerate kinase 91 468 IPR001576 GO:0004618|GO:0006096
Lal20g0495 484 SUPERFAMILY Phosphoglycerate kinase 87 478 IPR036043 GO:0004618|GO:0006096
Lal20g0495 484 CDD Phosphoglycerate_kinase 92 478 IPR001576 GO:0004618|GO:0006096
Lal20g0495 484 Hamap Phosphoglycerate kinase [pgk]. 87 478 IPR001576 GO:0004618|GO:0006096
Lal20g0495 484 Gene3D - 267 454 IPR015824 GO:0004618|GO:0006096
Lal20g0495 484 PANTHER PHOSPHOGLYCERATE KINASE 1 479 IPR001576 GO:0004618|GO:0006096
Lal20g0495 484 PANTHER PHOSPHOGLYCERATE KINASE 1 479 - -
Lal20g0495 484 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g0495 Lal-Chr20 4211304 4214645 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal20g0495 20 4211304 4214645 Lal20g0495 20 4211304 4214645 ECH