Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g0480 ATGAAACTAAGCTTAAGCAGTGTATATAGTCCTTCTAGCTTCCCTATAATCCTTAAATCTTATGCATTTAGCAATCTATGTAAACCCTTTTGTTCTTCAACACTATCATTATCTCCACCAGTTTCTTTGAAATCCCAAGTTCCCCTCTTTCTGAGGCCACCAATTTACTCAACCAAGTTGTGTGACTTCAAAAAATGGCATGATTGGGCCAAAGGTATTGCTTCTTCAATTGGGTCAACTTTTGTGAACTCAGATAATGGCCCAGACTCAAGCATTTTGTGCAGGGAGCTTAAGTGGTTAATGGAAGATGCTGTTGAAGACCACTCACTTTTTTCCAAGATGGGTTTTGAGAATAGTGATGAGAAAGTGAAAATGAGGGTTGGGATAGAAGAGCTTTATAATCTTTGGAAGGAGAGGATAGAAAAGAGAAGACCTTTTCAGTATGTAGTTGGATGTGAGCATTGGAGGGAATTGGTTTTGAGTGTCCAAGAAGGGGTTTTGATTCCAAGACCTGAAACTGAACTTATTGTTGATTTTGTGTGTGATGTTGTGTCAAAGAATGAGGATTTGAAAAGAGGGGTTTGGGCCGATTTGGGGACCGGAAGCGGTGCCCTTGCTATAGGCATTGGCCGGGCTTTGGGAATTGGAGGGAGGGTTGTTGCCGCAGATATAAGCCCTGTGTCAGTTGCTGTTGCAGCTTACAATGTGCAAAGGTACTGCTTACAGGACAAAATTGAAGTACGGGAGGGATCTTGGTTTGAACCATTGAAGGATATGGAAGGAAAGCTTGCAGGTCTTGTAAGCAACCCACCGTATATACCAAGTAAGGAAATCTCTGGTCTACAAGCTGAAGTTGGTAGGCATGAACCTAGAGTTGCATTAGATGGAGGTGTTGATGGCATGGATGCTCTTTTCCATCTCTGTGATGGGGCTGCTTTATTCTTGAAACCTGGTGGATTTTTTGCCTTTGAGACAAATGGGGAGCAACAATGCAGGGATCTTGTTGATTACATGAAAAATAAGAGAAGTGAAAGCTTATGCAATTTTGAAATAGTTGCAGATTTTGCTGGTATTCAAAGATTTAAGCGTCCGTTTTCTGTACGAGCCATCCCAGCTTATACAGCTCAAAACGTCAAGACAACCAGTTGGACAACTCGTATGGCTTCTTCCGTAGTTGCTAGAAGAGCTACATATTCAACAAAATCTGCATCCACGAATGAGCCAGTTGTTTCTGTGGATTGGCTTTATGATAACCTGAAGGATCCTGATATGAAGCTCCCACTTTTTGTTTTGTACTACTTCCTGTTTCTCGCATCTGCACCCTTTGTTTTGCAACAGTTCCTAAACAGATCTTATCCAGAACTGTGGCATCACTCTAGTGGCTGTTCTGCAACCTACTACGCCGCTATTGTGTACTTGGGAGTGGGCTCTGTTCTGCATTCCACTTTTTACTACCTTGGAAGTTTAAAACTAAAAAACCCTTCTTGTTTGATCACCAACTGGGTAATTGAAGATCTGGCTACGTGTGCAGTAACCATGTATCAGGTGCTGGATGCATCCTGGTACATGCCAGATGAGCAGAGGAATCCAATACAAGAATATCAGGTAGCTCACATTCCCGGGGCCCTTTTCTTTGATGTCGATGGAATATCAGATCAAACTACAAAGTTGCCACACATGTTGCCATCAGAGGAAGCTTTTGCTGCTGCTGTTTCTGCTCTTGGCATACAGAATAAAGATGATTTGGTTGTTTACGATGGCAAAGGAATATTTAGTGCTGCTCGTGTTTGGTGGATGTTCCGAGTGTTCGGGCATGACAGAATTTGGGTATTAGATGGCGGCCTTCCAAGATGGCGTGCATCAGGTTATGATGTTGAATCTAGTGCTTCAAGTGATGCTATTCTTAAAGCCAGTGCTGCAACTGAGGCAATAGAGAAAACATATCAGGGACTATCGGTTGGCCCAATCACATTTCAGACTAAATTTCAGCCACACCTTGTTTGGAACCTTGATCAGGTTAAGAAAAACATTGAGGAAAAAAGTCACCAACATATAGATGCTCGGTCAAAGCCAAGGTTTGATGGAGCTGCACCCGAGCCTCGAAAGGGAATAAGAAGTGGTCATGTACCTGGAAGCAAATGCATTCCTTTTGGCCAGTTGTTAGATAATGGTTCACATACACTATTACCAGAAGATGAGCTTAAGAAGCGATTTGATCAAGAAGGTATCTCTTCGGAAAGCCCCGTTGTGACTTCGTGTGGAACTGGAGTAACTGCTTGCATTCTTGCATTGGGTCTTCATCGTCTCGGAAAATCCGATGTTGCAGTTTATGATGGTTCTTGGACTGAATGGGGAGCACAATCTGATACACAAGTGGAAACTTCAGAACCTTGA 2394 0.4273 MKLSLSSVYSPSSFPIILKSYAFSNLCKPFCSSTLSLSPPVSLKSQVPLFLRPPIYSTKLCDFKKWHDWAKGIASSIGSTFVNSDNGPDSSILCRELKWLMEDAVEDHSLFSKMGFENSDEKVKMRVGIEELYNLWKERIEKRRPFQYVVGCEHWRELVLSVQEGVLIPRPETELIVDFVCDVVSKNEDLKRGVWADLGTGSGALAIGIGRALGIGGRVVAADISPVSVAVAAYNVQRYCLQDKIEVREGSWFEPLKDMEGKLAGLVSNPPYIPSKEISGLQAEVGRHEPRVALDGGVDGMDALFHLCDGAALFLKPGGFFAFETNGEQQCRDLVDYMKNKRSESLCNFEIVADFAGIQRFKRPFSVRAIPAYTAQNVKTTSWTTRMASSVVARRATYSTKSASTNEPVVSVDWLYDNLKDPDMKLPLFVLYYFLFLASAPFVLQQFLNRSYPELWHHSSGCSATYYAAIVYLGVGSVLHSTFYYLGSLKLKNPSCLITNWVIEDLATCAVTMYQVLDASWYMPDEQRNPIQEYQVAHIPGALFFDVDGISDQTTKLPHMLPSEEAFAAAVSALGIQNKDDLVVYDGKGIFSAARVWWMFRVFGHDRIWVLDGGLPRWRASGYDVESSASSDAILKASAATEAIEKTYQGLSVGPITFQTKFQPHLVWNLDQVKKNIEEKSHQHIDARSKPRFDGAAPEPRKGIRSGHVPGSKCIPFGQLLDNGSHTLLPEDELKKRFDQEGISSESPVVTSCGTGVTACILALGLHRLGKSDVAVYDGSWTEWGAQSDTQVETSEP 797
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g0480 797 ProSitePatterns Rhodanese C-terminal signature. 774 784 IPR001307 GO:0004792
Lal20g0480 797 TIGRFAM hemK_fam: methyltransferase, HemK family 130 362 IPR004556 GO:0006479|GO:0008276
Lal20g0480 797 MobiDBLite consensus disorder prediction 681 708 - -
Lal20g0480 797 Gene3D - 664 796 IPR036873 -
Lal20g0480 797 ProSiteProfiles Rhodanese domain profile. 678 793 IPR001763 -
Lal20g0480 797 Gene3D Vaccinia Virus protein VP39 160 366 IPR029063 -
Lal20g0480 797 Pfam Methyltransferase small domain 191 276 IPR007848 GO:0008168
Lal20g0480 797 ProSitePatterns Rhodanese signature 1. 534 545 IPR001307 GO:0004792
Lal20g0480 797 PANTHER THIOSULFATE SULFERTANSFERASE 391 426 IPR045078 GO:0016783
Lal20g0480 797 PANTHER THIOSULFATE SULFERTANSFERASE 514 795 IPR045078 GO:0016783
Lal20g0480 797 Gene3D - 496 640 IPR036873 -
Lal20g0480 797 ProSiteProfiles Rhodanese domain profile. 514 627 IPR001763 -
Lal20g0480 797 CDD TST_Repeat_2 669 786 - -
Lal20g0480 797 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 671 796 IPR036873 -
Lal20g0480 797 ProSitePatterns N-6 Adenine-specific DNA methylases signature. 266 272 IPR002052 GO:0003676|GO:0008168|GO:0032259
Lal20g0480 797 SMART rhod_4 497 624 IPR001763 -
Lal20g0480 797 SMART rhod_4 668 790 IPR001763 -
Lal20g0480 797 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 514 629 IPR036873 -
Lal20g0480 797 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 130 340 IPR029063 -
Lal20g0480 797 Pfam Rhodanese-like domain 508 620 IPR001763 -
Lal20g0480 797 Pfam Rhodanese-like domain 671 786 IPR001763 -
Lal20g0480 797 PANTHER THIOSULFATE/3-MERCAPTOPYRUVATE SULFURTRANSFERASE 1, MITOCHONDRIAL-LIKE 391 426 - -
Lal20g0480 797 PANTHER THIOSULFATE/3-MERCAPTOPYRUVATE SULFURTRANSFERASE 1, MITOCHONDRIAL-LIKE 514 795 - -
Lal20g0480 797 MobiDBLite consensus disorder prediction 681 701 - -
Lal20g0480 797 CDD TST_Repeat_1 499 622 - -
Lal20g0480 797 CDD AdoMet_MTases 197 277 - -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal20g0480 20 3973290 3985509 Lal20g0480 20 3973290 3985509 ECH