LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lal20g0437	ATGCAGAACCCATTAACACAAACAAACATGAACAACCCCTTCTTTAAGGTTGCTGTCGTGGGAAGTGGAATTTCAGGAGCTGTGTGTGCATCAACACTTGCCAGAAATGGGGTTTATGTAACTCTCTTTGAGTCAGCTAGAGGCCCTGGTGGACGCATGTCACAAAGAAGAGAGAAAATTGAAGATGGGAAGGAGTTGCATTTCGACCATGGTGCTCCATTTTTTTCGGTCAGCAAGTCTGAACTGTTATGTCTAGTTCAAGAGTGGCAGACAAGAGGTTTAGTAGCTGAATGGAAAGAAAAGTTTGGCTCATTTGATTTTCAAACCCTTAAATTTGACAGCATTCACCAGGAAGGATTGAGGAAGAGATATGTGGGTGTTCCAGGCATGAATTCTATATGTAAAGCATTATGCAATGAGAGTGGTGTGGAAAGCAAGTTCGGGGTGAGTGTTGGAAGAGTTGAATGGTTGGATGATGCAAAATTGTGGTCATTGACAGGGGTGGATGGACAGAATCTTGGTCAATTTAAGGGTCTTGTTGCATCAGACAAGAATATAGTTTCTCCCAGGATTGCGGAAGTGACAGGAAGATTGCCGCCACTTGATTTAAAGTTGGTGCCGGAGTTGTCAGCAAAGTTGCATAATCTTGCTGCTAAGCCATGTTTCGCTGTAATGCTGGCATTTACCGAGCCTCTGTCATCAATTCCAGTAAAAGGCTTCTCTTTTAAAAATTCTAAACTGCTAAGCTGGGCTTATTGTGATAGCAGCAAACCAAGTCGTTCTACCACAAGTGAAAGATGGGTTCTTCATTCAACAGCAGAATATGCAGCAGATATAATTGCTCAAACTGGACTCAAGAAACCCTCTGATATTACACTGAATAAAGTGGCTGAACAACTTTTCCAAGAATTTCAAAGCACTGGGCTTAACATATCTCAACCCTTTTACAAGAGAGCCCATAGATGGGGGAGTGCATTTCCAGCTGTGAGTATTGCTGAAGATGAAAAATGTTTGTGGGACAAAAGCAAGAGATTAGCCATATGTGGAGACTTTTGTGTTAGTCCCAATGTTGAAGGTGCCATAGAGAGTGGTTTGGCAGCAGCATTAAGGCTTAAAGATAGTAAATCATCTTCAGTGAGAGGGGTTCCCACAATTGCAAGGACTTCTTCTTCCTTCAAAGTTGTGGCCAGTGGTGTCAAGAAGATCAAGACTGACAAGCCTCTTGGAATTGGTGGTGGCATGAACTTGAGGGATGGAGTTGATGCATCTGGAAGGAAAGGAACTGGGAAGGGGGTATACCAGTATGTGGACAAATATGGTGCTAATGTTGATGGCTACAGTCCTATCTACACCCCGGAAGAATGGTCTCCAACCGGTGATGTCTATGCTGGCGGTGCCACTGGGTTGGCTATATGGGCTGTAACTCTAGCTGGTCTTCTTGCTGGAGGTGCACTTCTTGTCTACAACACAAGTGCTTTGGCACAATAG	1488	0.4375	MQNPLTQTNMNNPFFKVAVVGSGISGAVCASTLARNGVYVTLFESARGPGGRMSQRREKIEDGKELHFDHGAPFFSVSKSELLCLVQEWQTRGLVAEWKEKFGSFDFQTLKFDSIHQEGLRKRYVGVPGMNSICKALCNESGVESKFGVSVGRVEWLDDAKLWSLTGVDGQNLGQFKGLVASDKNIVSPRIAEVTGRLPPLDLKLVPELSAKLHNLAAKPCFAVMLAFTEPLSSIPVKGFSFKNSKLLSWAYCDSSKPSRSTTSERWVLHSTAEYAADIIAQTGLKKPSDITLNKVAEQLFQEFQSTGLNISQPFYKRAHRWGSAFPAVSIAEDEKCLWDKSKRLAICGDFCVSPNVEGAIESGLAAALRLKDSKSSSVRGVPTIARTSSSFKVVASGVKKIKTDKPLGIGGGMNLRDGVDASGRKGTGKGVYQYVDKYGANVDGYSPIYTPEEWSPTGDVYAGGATGLAIWAVTLAGLLAGGALLVYNTSALAQ	495

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lal20g0437	495	SUPERFAMILY	FAD/NAD(P)-binding domain	14	371	IPR036188	-
	Lal20g0437	495	Pfam	Flavin containing amine oxidoreductase	124	369	IPR002937	GO:0016491
	Lal20g0437	495	PRINTS	Adrenodoxin reductase family signature	16	38	-	-
	Lal20g0437	495	PRINTS	Adrenodoxin reductase family signature	39	52	-	-
	Lal20g0437	495	Pfam	NAD(P)-binding Rossmann-like domain	19	78	-	-
	Lal20g0437	495	Gene3D	-	17	368	IPR036188	-
	Lal20g0437	495	PANTHER	FAD/NAD(P)-BINDING OXIDOREDUCTASE FAMILY PROTEIN	9	372	-	-
	Lal20g0437	495	PANTHER	FAD/NAD(P)-BINDING OXIDOREDUCTASE FAMILY PROTEIN	9	372	-	-
	Lal20g0437	495	Gene3D	-	55	334	-	-
	Lal20g0437	495	Pfam	Photosystem II 10 kDa polypeptide PsbR	397	494	IPR006814	GO:0009523\|GO:0009654\|GO:0015979\|GO:0042651

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lal20g0437	Lal-Chr20	3538782	3548926	Wgd

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Lal20g0437	20	3538782	3548926	Lal20g0437	20	3538782	3548926	ECH