Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g0432 ATGCTTATATTAGTGGGAAACGTGCAAGGAACAATGGGTTCTCTAGGTTCCCCTGTGAGTTTGGGGAACCTAACGTGTGTGAGTTCTTCTAGAATGTCACATTCTAGTGTGAGGAGAGTGTCTTTCTCTATAGGGAACTGTAAGGGTAAGAAGAATTGGCATTGTGTGTCTTTGTCTGTATGTAGATATTCAGTTATCACAACTGATTTTGTTGCTGATCAAGGAAATTCAGTGTCCCTTGATTCTAACAGTAGTAGAGAAAGTAGTAGTAAGGGTGGAGATGATAGTGCTGATTATGTACTTAAGCCTCCTCCTAAGCCTGTTTTGAAGTCCCCGAGCGGTAGGGGTAATGCCATTTTAGGCATGAATTCGAGGAATAGTGAGGTGGGTGGTGATGTGGAAGAGAGGAGTGAAGTGATTGAATCGCTTGGTGATGTGCTGGAGAAGGCTGAAAAGCTGGGGAGTAATAATTCTAAGCTGGATGATAGTAAAAGGAATATCAGGTCGGTGAATAAACCGGCGGTATCTAATGTCAATGCTAATTCTAGAGCTGATAAAACTGTAAATTCAACAAAAAACCAGAAGGCTAAGACTGTGAAGAGTGTGTGGCGTAAAGGTGATACGGTTTCGACTGTCCCGAAGGTTGTGAAGGAAGTGCCTAAGCCTAGTATTAACAATAATGAAAGGGGGATTTCTCAAATTGGGGGAGGGCAGATAGCATCTCAATCTCGCGCTCCTCAGCTACCTCCAAAACCTCAACCGATGTTACAAACTAGACCTTCTATAGCTCCCCCAGCCCCACCACCCGTGAAAAAGCCTGTTGTCTTGAAGGATATAGGTGCAGCTGACAAACCGGTTAAATCTAAAGAAAGGAAAGGACCCATCTTGATTGACAAATTTGCTTCCAAGAAACCAGTTGTCGATCCTGTAATTGCTCAAGCTGTTCTTGCCCCTACAAAACCAGGGAAGGCCCCTCCACCGGGAAGGTTTAAAGACGATTACCGGAAGAAAGGTGCTCCGGCTGGGGGTGGAGCAAGAAGACGAAAACTTGACAATGCTATTCCTGATGATGACACATCAGAACTGAATGTCTCTATTCCTGGTGCTGCAAGAAAAGGAAGGAAATGGAGTAAAGCTAGTCGAAAGGCAGCAAGACTCCAGGCTGCCAGGGATGCAGCTCCCGTGAAAGCAGAAATTCTCGAGGTTAGTGATAAAGGTATGCTGGTGGAGGAGTTGGCCTATAACTTGGCGATCAGTGAAGGTGAAATTCTGGGTTCTCTTTACTCCAGGGGGATTAAACCAGATGGGGTACAAACTCTGGACAAAGATATGGTGAAGATGATTTGTAAAGAATATGATGTGGAAGTCATAGATGCTGACCCTGTCAAAGTTGAAGCATTGGCGAAGAAAAGAGAATTCCTTGACGAAGATGACCTTGACAAACTCAAAGATAGGCCTCCTGTCATCACTATCATGGGCCATGTAGATCATGGCAAAACAACTCTTTTGGACTATATACGGAAGAGCAAGGTAGCTGCTTCTGAAGCTGGTGGGATCACACAAGGAATTGGTGCTTATAAAGTGCAAGTACCTTTCGATGGCAAACAGTTGCCTTGTGTTTTCCTTGACACTCCTGGGCATGAGGCATTTGGGGCAATGAGAGCTCGCGGAGCAAGAGTAACAGATATTGCTATCATTGTTGTCGCTGCTGATGATGGTATTCGTCCTCAAACAAATGAAGCAATAGCTCACGCCAAAGCAGCAGGGATAGATAAAAATGGAGCAAATCCAGACCGAGTCATGCAAGAGCTTTCTTCAATTGGTCTAATGCCTGAAGACTGGGGTGGTGATGTTCCAATGGTCCAGGTAAGTGCTCTTAAAGGGGAGAATGTAGATGATCTCTTGGAAACTATTATGCTCGTTGCTGAGTTGCAAGAGCTGAAAGGTAATCCTGATAGAAGTGCAAAGGGTACAGTCATTGAGGCAGGTCTAGATAAATCAAAAGGACCACTTGCTACATTTATTGTGCAGAATGGCTCCCTTAAAAGGGGAGATATAGTGGTTTGTGGAGAAGCTTTTGGAAAGGTGCGGGCTTTATTTGATGATGGTGGAAAGCGTGTCGTTTTAGCTACGCCCTCTACACCTGTACAGGTTATTGGATTGAATAATGTTCCACATGCTGGTGATGAATTTGAGGTTGTTGAGTCCCTTGACACTGCGCGTGAAAGGGCAGAGTCCCGTGCTGAGTCATTGCGAAATGAACGTATTTCAGCAAAGGCAGGGGATGGCAAAGTCACCCTTTCTTCCTTAGCTTCTGCAGTTTCATCAGGAAAGCTTTCTGGACTAGACTTGCACCAACTGAATATTATCTTGAAGGTTGATCTTCAGGGATCCATTGAAGCTGTGAGACAAGCGCTGGAGGTGCTACCACAAGATAATGTCACATTGAAGTTTTTGTTAGAAGCAACAGGTGATGTGAACACAAGTGATGTTGACCTCGCAACCGCAAGCAAAGCTATTATTTTTGGATTTAATGTCAAAGCACCAGGCTCTGTGAAAAGCTATGCGGAGAATAAACTTGTTGAGATTAGATTATACAAAGTTATATATGAACTAATCGACGACGTGCGAAATGCAATGGAAGGGCTCTTGGATCTTGTTGAGGAACAAATAACAATTGGCTCAGCGGATGTACGGGCCACATTCAGCAGTGGTAGTGGTCGTGTTGCTGGATGCATGATTACGGAGGGAAAGATAACAAAAGGCTGTGGTATTCGAGTCATTCGAAAGGGAAAAGTAATTCATGTTGCTGTTCTTGATTCTTTGAGACGAGTGAAGGAGATTGTTAAAGAGGTAAATGCTGGTCTTGAGTGTGGAATTGGATTAGAAGATTATGACGATTGGGAAGAGGGTGATCGCGTTGAAGCCTTTAACAAAGTTCAGAAGAAGCGAACGCTCGAAGAGGCCTCAACATCGATGGCAGCTGCTGTGGAAGGAGTAAGTGCTTGA 3009 0.4437 MLILVGNVQGTMGSLGSPVSLGNLTCVSSSRMSHSSVRRVSFSIGNCKGKKNWHCVSLSVCRYSVITTDFVADQGNSVSLDSNSSRESSSKGGDDSADYVLKPPPKPVLKSPSGRGNAILGMNSRNSEVGGDVEERSEVIESLGDVLEKAEKLGSNNSKLDDSKRNIRSVNKPAVSNVNANSRADKTVNSTKNQKAKTVKSVWRKGDTVSTVPKVVKEVPKPSINNNERGISQIGGGQIASQSRAPQLPPKPQPMLQTRPSIAPPAPPPVKKPVVLKDIGAADKPVKSKERKGPILIDKFASKKPVVDPVIAQAVLAPTKPGKAPPPGRFKDDYRKKGAPAGGGARRRKLDNAIPDDDTSELNVSIPGAARKGRKWSKASRKAARLQAARDAAPVKAEILEVSDKGMLVEELAYNLAISEGEILGSLYSRGIKPDGVQTLDKDMVKMICKEYDVEVIDADPVKVEALAKKREFLDEDDLDKLKDRPPVITIMGHVDHGKTTLLDYIRKSKVAASEAGGITQGIGAYKVQVPFDGKQLPCVFLDTPGHEAFGAMRARGARVTDIAIIVVAADDGIRPQTNEAIAHAKAAGIDKNGANPDRVMQELSSIGLMPEDWGGDVPMVQVSALKGENVDDLLETIMLVAELQELKGNPDRSAKGTVIEAGLDKSKGPLATFIVQNGSLKRGDIVVCGEAFGKVRALFDDGGKRVVLATPSTPVQVIGLNNVPHAGDEFEVVESLDTARERAESRAESLRNERISAKAGDGKVTLSSLASAVSSGKLSGLDLHQLNIILKVDLQGSIEAVRQALEVLPQDNVTLKFLLEATGDVNTSDVDLATASKAIIFGFNVKAPGSVKSYAENKLVEIRLYKVIYELIDDVRNAMEGLLDLVEEQITIGSADVRATFSSGSGRVAGCMITEGKITKGCGIRVIRKGKVIHVAVLDSLRRVKEIVKEVNAGLECGIGLEDYDDWEEGDRVEAFNKVQKKRTLEEASTSMAAAVEGVSA 1002
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g0432 1002 MobiDBLite consensus disorder prediction 225 246 - -
Lal20g0432 1002 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 477 648 IPR027417 -
Lal20g0432 1002 CDD IF2_mtIF2_II 655 749 IPR044145 -
Lal20g0432 1002 Pfam Translation-initiation factor 2 783 876 IPR023115 -
Lal20g0432 1002 MobiDBLite consensus disorder prediction 247 271 - -
Lal20g0432 1002 PRINTS GTP-binding elongation factor signature 488 501 IPR000795 GO:0003924|GO:0005525
Lal20g0432 1002 PRINTS GTP-binding elongation factor signature 540 550 IPR000795 GO:0003924|GO:0005525
Lal20g0432 1002 PRINTS GTP-binding elongation factor signature 556 567 IPR000795 GO:0003924|GO:0005525
Lal20g0432 1002 Coils Coil 734 761 - -
Lal20g0432 1002 TIGRFAM IF-2: translation initiation factor IF-2 405 986 IPR000178 GO:0003743|GO:0003924|GO:0005525|GO:0006413
Lal20g0432 1002 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 484 648 IPR000795 GO:0003924|GO:0005525
Lal20g0432 1002 SUPERFAMILY Initiation factor IF2/eIF5b, domain 3 782 894 IPR036925 -
Lal20g0432 1002 SUPERFAMILY Translation proteins 651 735 IPR009000 -
Lal20g0432 1002 MobiDBLite consensus disorder prediction 172 197 - -
Lal20g0432 1002 MobiDBLite consensus disorder prediction 172 202 - -
Lal20g0432 1002 MobiDBLite consensus disorder prediction 219 271 - -
Lal20g0432 1002 MobiDBLite consensus disorder prediction 326 340 - -
Lal20g0432 1002 Gene3D - 783 886 IPR036925 -
Lal20g0432 1002 MobiDBLite consensus disorder prediction 318 361 - -
Lal20g0432 1002 MobiDBLite consensus disorder prediction 76 90 - -
Lal20g0432 1002 Gene3D Translation factors 888 985 - -
Lal20g0432 1002 CDD mtIF2_IVc 894 976 - -
Lal20g0432 1002 SUPERFAMILY Translation proteins 891 984 IPR009000 -
Lal20g0432 1002 PANTHER TRANSLATION INITIATION FACTOR IF-2, CHLOROPLASTIC 44 994 - -
Lal20g0432 1002 PANTHER TRANSLATION INITIATION FACTOR IF-2-RELATED 44 994 IPR015760 -
Lal20g0432 1002 TIGRFAM small_GTP: small GTP-binding protein domain 486 638 IPR005225 GO:0005525
Lal20g0432 1002 Gene3D Translation factors 651 767 - -
Lal20g0432 1002 Pfam Elongation factor Tu GTP binding domain 489 640 IPR000795 GO:0003924|GO:0005525
Lal20g0432 1002 Hamap Translation initiation factor IF-2 [infB]. 7 984 IPR000178 GO:0003743|GO:0003924|GO:0005525|GO:0006413
Lal20g0432 1002 Gene3D - 481 650 IPR027417 -
Lal20g0432 1002 CDD IF2_eIF5B 487 644 - -
Lal20g0432 1002 MobiDBLite consensus disorder prediction 76 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g0432 Lal-Chr20 3500897 3508310 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal20g0432 485 878 Eukaryotic Initiation Factors Gene Family AT1G21160 26.875 3.01e-22 101
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal20g0432 20 3500897 3508310 Lal20g0432 20 3500897 3508310 ECH