Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g0431 ATGGAGGATAATAATAATAATAATAATTATCAATGGAATCTCTATGACCATGATGACCCTCTTCTTCTCACTGATGTTACTTTGCAACAAGGAACCTCTTCCATTTGTGTTTCTCAAACATCACTGAGCTCTAGGTTTTCGGTTATGGCGGTGGAGAATGATTCTCATGGTGGCAGCCCAAGTTACGGGTTTTGTAGGGAAAATGGAAGCTTTGAAGGGAAAAACGTGCAATTTGATGACCCGGTACTGAAAAATATGGATGATGGTAGATCCATGTTGGGGTATTCTCTAACTTCTCCAGATTTGGTGATCTGTGGTGTCTCACCAGATATTGCTGGAATCAGTTATGGTAGTGATTCCCCTGAGTTAATGGGGGGAAAATATTGCAAGAATTTGGCCTCATCTATAGAACTTTCACTAGAGAATGGAATCAATGGGTCTGAAGTTGAAGTTGACAATGGCTATAATAAGACCAAAACTGTTAAATTTTCTAATTTGTGTCAGACTTTTGAACAAGAGGAACAAGTGCTATCTCCTGAAGCCTCCTTTGAGCTTCCTCTACCTCCATTAACCAAGGAGGAGTCACTTCAGGACTACCCTCCTATAGAAGATGACCTGTTAGAAGATATGAGAGTGTCTCAGGAGGCAGCATTAGAGACCTTAGAAGATAATGAGGATGTTGGGGTGGAAGGAAAATTTCAGAAGCTGAAAAGAGATTTTGAGTGTCAGAGAAAGGAACTGAAAGAAACAATGCGGGAGTTGGGGGAGATTAAGAGGGAGAATCAACAGAAGAGTAGAGAATGCCAGGAAGCTTGGAACTCCTTGAAAGAGCTTCAGAATGAGCTCATGCGCAAGTCCATGCATGTAGGATCTTTAGCATTTGCTGTTGAGGGGCAAGTGAAAGAGAAAAGCAGGTGGTTTTCATCACTGAGAGACTTGACAAGGAAATTGAAGATTATGAAAATGGAACACATCAAGCTATTAGAGGAAGCAGAGGCATACAAGAAATGTCAAGCAGATATGAGTGACATAAATCTTATTATTATGTCTAAAATAAATGAAGAACTGAAGGCACATGAAGATCTCAAGTTTAAATATATTGAAGGGACTAAGGAATGTAAAGAGCTTTATAATAAGGTGTTGGAGTTGAGAGGAAACATAAGGGTCTTTTGCCGGTGTAGGCCTCTCAATGCTGAAGAGTTAACAGCAGGAGCTGCAATGGCCATAGATTTTGAATCTGCTAAAGATGGTGAGCTTACTGTAATGTCAAATGGAGCTCCTAGAAAGACTTTCAAGTTTGATGCTGTCTTTAGCCCCCAAGCTGAACAAGCTGATATTTTTGAAGACACGGCTCCATTTGCAACCTCAGTTCTAGATGGATACAATGTATGCATTTTTGCATATGGGCAGACCGGGACTGGAAAAACTTTCACAATGGAGGGCACAGAAGTGGCTCGTGGAGTCAATTTCAGGACACTTGAGAAAATGTTTGACATAATTAAGGAGAGAGAGACTGTCTATCGCTATGATGTCTGTGTAAGTGTCTTAGAAGTGTACAATGAGCAACTAAGAGATTTGCTGGTTCCGGGAAATCAGTCAGGAATGGCTGCAAGAAGACTGGAAATAAGGCAAGATGGTGAAGGAATGCATCATGTTCCGGGGTTGGTGGAAGCACATATGAACAATATGACTGAAGTCTGGGAAGTCCTACAAACTGGTAGCAATGCAAGGGCTGTAAGCTCAACAAATGCCAACGAGCATAGCAGCCGATCCCACTGGTCAGCTTCAGCTTCTTTTAATTGGTTTGAATTGGGGGAGAATTTGTTGAATGGGGAATGCACAAGAAGCAAGTTATGGCTAGTGGACCTAGCAGGCAGTGAGCGAGTGGCGAAGACAGAAGTGCAAGGCGATCGCCTGAAGGAGACACAAAATATTAACAGGTCTCTATCTGCACTTGGAGATGTCATATCAGCCCTTGCAACAAGAAGTCCTCACATCCCTTTCAGGAACTCCAAGCTTACACACTTGTTGCAAGACTCATTAGGAGGAGACTCAAAGACACTCATGTTTGTACAAATCAGTCCTAACGAAAATGATTTGAGTGAAACAATCTGCTCTCTGAACTTTGCTAGTAGAGTAAGGGGAATAGAACTTGGCCCTGCAAAAAAACAGTTGGACACTGTTGAACTTCTGAAACACAAACAAATGTCTGACAAAACCAAACAAGAGGTGAAAGTGAAGGATATGAGAATAAAGATGATGGAGGAAATGATCTATGGATTAGAGTCCAAGATGAAGGAAAGAGATAACAAAAACAAAAGTCTGCAAGACAAGGTCAAGGAACTGGAATCACAACTTATGATCGAGAGAAAGCTAGCTCGTCAACATGTAGACTCAAAGATAGCCGAGCAGCATCAAATGAAACAACAAGAAGAGCAAAATAATGCATTCATGATGAGAACAGTATTTGTAAATCGGCCCCTCGGAAGTCAGAAGAATTGTAACGATCCTGTGAGTGGTGGATGGTGCAAAGACCAAATGAGTTCAGCTAGACCACTTATGGAGAACAACAACTTAAAACCTTCAATACCCTTTTCTACAATGGAAAGCTCCATCAACTACATTGATCATGCTGAAAAAGAAAACAATCCTGAGATAGCTGAAAGAGTCTTTTTGGCAAAACGGAGTGGAAGAGTTTCAATGTGTCCAATAATGACATCACATGTTCCTTCAGCCGCTGCTGCTTCAAGGCGCAACTCTCTCATTCCACTACCAAGTGTACCTAGCTTAACACAATTCTCATCACCATTATTACCAAAGTTAACAAACCGAGCTGACCCAAAAGATATCAATAATGGTGAATTAGAAACCAACTGCTTATTGCCTCAATGTGAAAGTCCAAAAGAAGTAAGAAGTGGAGTTAAGAAGAACATACTAAGAAGGAGCCTGCATAAGAAAAAGTCTCCAATGCAGCAACACATGATGAGAAAGGTTGGTGTAAATGTAGGGATGGAGAAAGTTAGAGTTTCTATTGGAAGTAGAGCAAGAGTAGCACAAAAGATTCAACCAGGAAGTGGTAGAAGAGGTGGAGGTAAAGAGTTTCAACAAAAGAATAGCAAAAAGGAAAAGGAAAGAGGATGGGTTTGA 3147 0.4102 MEDNNNNNNYQWNLYDHDDPLLLTDVTLQQGTSSICVSQTSLSSRFSVMAVENDSHGGSPSYGFCRENGSFEGKNVQFDDPVLKNMDDGRSMLGYSLTSPDLVICGVSPDIAGISYGSDSPELMGGKYCKNLASSIELSLENGINGSEVEVDNGYNKTKTVKFSNLCQTFEQEEQVLSPEASFELPLPPLTKEESLQDYPPIEDDLLEDMRVSQEAALETLEDNEDVGVEGKFQKLKRDFECQRKELKETMRELGEIKRENQQKSRECQEAWNSLKELQNELMRKSMHVGSLAFAVEGQVKEKSRWFSSLRDLTRKLKIMKMEHIKLLEEAEAYKKCQADMSDINLIIMSKINEELKAHEDLKFKYIEGTKECKELYNKVLELRGNIRVFCRCRPLNAEELTAGAAMAIDFESAKDGELTVMSNGAPRKTFKFDAVFSPQAEQADIFEDTAPFATSVLDGYNVCIFAYGQTGTGKTFTMEGTEVARGVNFRTLEKMFDIIKERETVYRYDVCVSVLEVYNEQLRDLLVPGNQSGMAARRLEIRQDGEGMHHVPGLVEAHMNNMTEVWEVLQTGSNARAVSSTNANEHSSRSHWSASASFNWFELGENLLNGECTRSKLWLVDLAGSERVAKTEVQGDRLKETQNINRSLSALGDVISALATRSPHIPFRNSKLTHLLQDSLGGDSKTLMFVQISPNENDLSETICSLNFASRVRGIELGPAKKQLDTVELLKHKQMSDKTKQEVKVKDMRIKMMEEMIYGLESKMKERDNKNKSLQDKVKELESQLMIERKLARQHVDSKIAEQHQMKQQEEQNNAFMMRTVFVNRPLGSQKNCNDPVSGGWCKDQMSSARPLMENNNLKPSIPFSTMESSINYIDHAEKENNPEIAERVFLAKRSGRVSMCPIMTSHVPSAAAASRRNSLIPLPSVPSLTQFSSPLLPKLTNRADPKDINNGELETNCLLPQCESPKEVRSGVKKNILRRSLHKKKSPMQQHMMRKVGVNVGMEKVRVSIGSRARVAQKIQPGSGRRGGGKEFQQKNSKKEKERGWV 1048
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g0431 1048 Pfam Kinesin motor domain 392 716 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal20g0431 1048 MobiDBLite consensus disorder prediction 1011 1048 - -
Lal20g0431 1048 PANTHER KINESIN-LIKE PROTEIN KIN-14Q 220 1034 - -
Lal20g0431 1048 CDD KISc_C_terminal 384 718 - -
Lal20g0431 1048 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 386 754 IPR027417 -
Lal20g0431 1048 Coils Coil 310 330 - -
Lal20g0431 1048 ProSitePatterns Kinesin motor domain signature. 616 627 IPR019821 GO:0003777|GO:0005524|GO:0007018
Lal20g0431 1048 MobiDBLite consensus disorder prediction 1033 1048 - -
Lal20g0431 1048 PRINTS Kinesin heavy chain signature 460 481 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal20g0431 1048 PRINTS Kinesin heavy chain signature 582 599 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal20g0431 1048 PRINTS Kinesin heavy chain signature 617 635 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal20g0431 1048 PRINTS Kinesin heavy chain signature 666 687 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal20g0431 1048 Coils Coil 233 281 - -
Lal20g0431 1048 ProSiteProfiles Kinesin motor domain profile. 386 716 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal20g0431 1048 SMART kinesin_4 384 724 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal20g0431 1048 Coils Coil 765 792 - -
Lal20g0431 1048 Gene3D Kinesin motor domain 381 757 IPR036961 -
Lal20g0431 1048 PANTHER KINESIN-LIKE PROTEIN KLP-3 220 1034 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g0431 Lal-Chr20 3493570 3499528 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal20g0431 374 736 Calmodulin-binding Proteins AT5G65930 43.869 3.21e-78 278
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal20g0431 20 3493570 3499528 Lal20g0431 20 3493570 3499528 ECH