Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g0430 ATGGACGAAAACACTTTCTTCTTCGCACCAGACTCAGACCTTGATCTCAGTTTCACAAGCACCACCACCGACCGCACCTTTACCTCTTCCAGTGCACGCACCAGTTTAGCCCGCAGCAGTTTAACTCTCAGCTTCAACGACCGTCTCTCCACCACTTCTTCCACTACCACTTACTCTTCCACCTCCGTCATATGCCGTCCCCACCGCAGCTCCGATCCTCATTGGTCTGCAATCAAGGCTGCAACCATCCTTTCCTCTGACGGCCGCCTCCATCTCCGTCACCTCAAGCTCATCCGCCACCTTGGAACCGGCAACCTCGGCCGCGTCTTCCTCTGCCGCCTCCGTGACTACGACGGCGCTAACTTCGCTCTCAAGGTTGTCGACAAGGATCTACTCAGCGCTAAGAAACTCTCCCACGTTGAAACTGAAGCCGAGATCCTCCACGCGCTTGATCACCCGTTTCTCCCCACGCTCTACGCGCGCATAGATGTTTCACATTACACGTGTCTCCTTATAGACTACTGCCCAGGCGGTGACCTCCACTCTCTCCTATGCAAGCAGCCTGGTAATCGATTATCAATCCAGGCTGCTCGATTCTTCGCGGCGGAGATACTCGTCGCATTAGAGTACCTCCACGCACTTGGTATTGTTTACCGCGACCTTAAACCTGAAAATATTTTGTTACGCAACGATGGCCACGTCATGCTTTCGGATTTCGACTTGTGTTTTAAAGCTGACGTGGCACCTATATTTGAATACCGGGCCCACTCTAAGGTAAAAACAAAAGTCAGTTGTTTCAGTTACCAAAGTAGATCTTCAAAAGAAAAGGTTGTGGCAGAGTTTATAGCTGAACCAATAACGGCGTTTTCACGGTCATGTGTTGGGACACATGAATATTTGGCGCCAGAGCTTGTAACAGGTAACGGTCACGGTAACGGTGTGGATTGGTGGGCTTTTGGGGTGTTTATTTATGAAATGTTATATGGGACGACACCGTTTAAGGGGTGTAATAAAGAAAACACACTGCGCAATATAGCATCAAGTAAAGAAATGAGGTTCCACGTGGCAGATAGAGAGGAGATAGGGATGGTAGAAGCAAAAGATTTGATAGAGAAACTTTTGGTTAAGGACCCAATGAAGAGGTTAGGGTGTTGTAGGGGTGCCACTGATATTAAGGGACACCCATTTTTTAATGGGATAAAGTGGCCCTTAATTAGGACCTATAAGCCACCGGAAGTTAAGGGATTATTGAGGAGGAAGAGTAGGTCAAATATTAGTAATGTGACCCTAAAGAAGAGAAGATGGTGGTGGAAGGGGCTTGAGTATGTCATTAGGAATAAGGGTGTGCAATCTAATTTTTTGTCAAGCTATAGTAATAATAATAATTATCAATATGTTAATAGTAGTAAGATTAGGTGA 1419 0.4686 MDENTFFFAPDSDLDLSFTSTTTDRTFTSSSARTSLARSSLTLSFNDRLSTTSSTTTYSSTSVICRPHRSSDPHWSAIKAATILSSDGRLHLRHLKLIRHLGTGNLGRVFLCRLRDYDGANFALKVVDKDLLSAKKLSHVETEAEILHALDHPFLPTLYARIDVSHYTCLLIDYCPGGDLHSLLCKQPGNRLSIQAARFFAAEILVALEYLHALGIVYRDLKPENILLRNDGHVMLSDFDLCFKADVAPIFEYRAHSKVKTKVSCFSYQSRSSKEKVVAEFIAEPITAFSRSCVGTHEYLAPELVTGNGHGNGVDWWAFGVFIYEMLYGTTPFKGCNKENTLRNIASSKEMRFHVADREEIGMVEAKDLIEKLLVKDPMKRLGCCRGATDIKGHPFFNGIKWPLIRTYKPPEVKGLLRRKSRSNISNVTLKKRRWWWKGLEYVIRNKGVQSNFLSSYSNNNNYQYVNSSKIR 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g0430 472 Gene3D Transferase(Phosphotransferase) domain 1 179 415 - -
Lal20g0430 472 Gene3D Phosphorylase Kinase; domain 1 94 424 - -
Lal20g0430 472 CDD STKc_phototropin_like 93 413 - -
Lal20g0430 472 ProSitePatterns Serine/Threonine protein kinases active-site signature. 216 228 IPR008271 GO:0004672|GO:0006468
Lal20g0430 472 ProSiteProfiles Protein kinase domain profile. 95 397 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal20g0430 472 PANTHER FLIPPASE KINASE 1-RELATED 7 435 - -
Lal20g0430 472 SMART serkin_6 95 397 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal20g0430 472 PANTHER SERINE/THREONINE-PROTEIN KINASE WAG2 7 435 - -
Lal20g0430 472 SUPERFAMILY Protein kinase-like (PK-like) 71 412 IPR011009 -
Lal20g0430 472 Pfam Protein kinase domain 97 397 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g0430 Lal-Chr20 3481963 3483381 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal20g0430 1 469 AGC Kinase Gene Family AT3G14370 65.844 0.0 595
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Lal20g0430 Pkinase 4e-55 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal20g0430 20 3481963 3483381 Lal20g0430 20 3481963 3483381 ECH