Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g0428 ATGGAAGATGAGGTTGTTCTATTAGATACCTGGGCCAGTGCATTTGGCATGAGAGTTAGGATTGCATTAGCTGAAAAGGGTATAAATTATGAGTACAAAGAAGAGAATCTTACAAACAAAAGTCCCTTGCTTCTGCAGATGAATCCACTTCACAAAAAAATCCCAGTTCTTATCCATAATGGCAAGCCCATATGTGAATCTTCAATTATTTTGCAATACATAGATGATGTTTGGAAGAACAAAGCTCCACTTTTACCCTCTGATCCTTACCACAGAGCTCAAGCTAGATTTTGGGTAGATTACATTGACAAAGAGCGTAAGGCCTTATTGGATCAACAGATGGACCAAAAAGTCAAATGTTTAGTTCTCGGCGGCGACATGCGACATGTACCCCGAAAGGTATATGTTACTTGGAGGAAAATGTGGCTTTCTAAAGGAGAAGAGCATGAAGCAGGGAAGAAGGAATTGATCTCTATATTTAAGCTACTAGAGGAGACATTAGGAGACAAAACATTTTATGGAGGTGACACATTTGGGTTTGTTGATGTTACTTTGATCCCTTTCTATAGCTGGTTTTATACTTTTGAAACCTTTGGTAACTTCAAAATGGAAGTAGAGTGTCCTAAACTTCTTGCTTGGACCAAGAAATGCATGCAGATAGAGAGTGTCTTAAAGACTCTTCCTGATGAGAAAAAGGTGTATGATTATATTGTGGCATTGCAGAAAACACTTAGATTGGAGTAA 744 0.3831 MEDEVVLLDTWASAFGMRVRIALAEKGINYEYKEENLTNKSPLLLQMNPLHKKIPVLIHNGKPICESSIILQYIDDVWKNKAPLLPSDPYHRAQARFWVDYIDKERKALLDQQMDQKVKCLVLGGDMRHVPRKVYVTWRKMWLSKGEEHEAGKKELISIFKLLEETLGDKTFYGGDTFGFVDVTLIPFYSWFYTFETFGNFKMEVECPKLLAWTKKCMQIESVLKTLPDEKKVYDYIVALQKTLRLE 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g0428 247 Gene3D Glutaredoxin 1 86 - -
Lal20g0428 247 PANTHER GLUTATHIONE S-TRANSFERASE, AMINO-TERMINAL DOMAIN PROTEIN 4 105 - -
Lal20g0428 247 PANTHER GLUTATHIONE S-TRANSFERASE, AMINO-TERMINAL DOMAIN PROTEIN 129 240 - -
Lal20g0428 247 SUPERFAMILY GST C-terminal domain-like 76 242 IPR036282 -
Lal20g0428 247 CDD GST_N_Tau 5 78 - -
Lal20g0428 247 Gene3D - 127 247 - -
Lal20g0428 247 SFLD Glutathione Transferase (cytosolic) 2 110 IPR040079 -
Lal20g0428 247 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 88 236 IPR010987 -
Lal20g0428 247 Pfam Glutathione S-transferase, N-terminal domain 7 75 IPR004045 -
Lal20g0428 247 SFLD Main.3: Omega- and Tau-like 2 110 IPR045073 -
Lal20g0428 247 CDD GST_C_Tau 89 240 IPR045074 GO:0004364|GO:0006749
Lal20g0428 247 Gene3D - 87 120 - -
Lal20g0428 247 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 129 240 IPR045073 -
Lal20g0428 247 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 4 105 IPR045073 -
Lal20g0428 247 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 82 IPR004045 -
Lal20g0428 247 Pfam Glutathione S-transferase, C-terminal domain 150 214 - -
Lal20g0428 247 SUPERFAMILY Thioredoxin-like 5 104 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g0428 Lal-Chr20 3466805 3468109 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal20g0428 1 247 Glutathione S-transferase Gene Family AT1G17180 55.466 1.25e-100 290
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal20g0428 20 3466805 3468109 Lal20g0428 20 3466805 3468109 ECH