Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g0427 ATGGTGGATGAGAGCAAGGTGGTTTTGTTAGGCTCAGGGTTCAGCATGTTTGGGATGAGAGCTAAGATAGCTTTAGAAGAGAAAGGAATCAAATATGAATATATAGAACAAGATCTTACCAATAAAAGTCTCTTACTTGTTGAAATGAACCCAATCCACCAAAAGATTCCAGTTCTCATACATAATGGGAGACCAATCTGTGAGTCCCTTATAATTGTTGAGTATATTGATTTGGTTTGGAATAACAATCCTTTATTCCTTCTCTCTCACCCATATCAAAGATCTCAAGCCAGGTTTTGGGCTAACTTTGTTGATCAAGAGGTGTACCATGTTTCTAGGAGAGTATGGAGTTCAAAGGGAAATGAGCAAGAGATGGCAAAAAAGGACTTTATAGAGAGCTTAAAGCAATTAGAAAATGAACTTGGAGACAAGCCTTATTTTGGGGGTAACACTTTTGGGTTTGTTGATATTGCTCTTATTCCTTTCTATTGTTGGTTTTATACTTATGAAACATTTGGCAAGTTTAAAGTGGAGAAAGAGTGTCCAAAACTTATAACATGGGCTAAAAGATGCATGCAGAGGGAAAGTGTATCAAAAACTCTTGCAGATGGAAAACAAGTTTATGAGTCTGTTTTAGATTACAATAAGTTAATTTTGGACTAG 663 0.3605 MVDESKVVLLGSGFSMFGMRAKIALEEKGIKYEYIEQDLTNKSLLLVEMNPIHQKIPVLIHNGRPICESLIIVEYIDLVWNNNPLFLLSHPYQRSQARFWANFVDQEVYHVSRRVWSSKGNEQEMAKKDFIESLKQLENELGDKPYFGGNTFGFVDIALIPFYCWFYTYETFGKFKVEKECPKLITWAKRCMQRESVSKTLADGKQVYESVLDYNKLILD 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g0427 220 SUPERFAMILY Thioredoxin-like 6 109 IPR036249 -
Lal20g0427 220 CDD GST_C_Tau 91 214 IPR045074 GO:0004364|GO:0006749
Lal20g0427 220 Pfam Glutathione S-transferase, N-terminal domain 10 77 IPR004045 -
Lal20g0427 220 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 90 214 IPR010987 -
Lal20g0427 220 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 6 214 IPR045073 -
Lal20g0427 220 SUPERFAMILY GST C-terminal domain-like 80 215 IPR036282 -
Lal20g0427 220 Gene3D Glutaredoxin 1 87 - -
Lal20g0427 220 SFLD Main.3: Omega- and Tau-like 4 216 IPR045073 -
Lal20g0427 220 Gene3D - 90 219 - -
Lal20g0427 220 Coils Coil 120 140 - -
Lal20g0427 220 SFLD Main (cytGST) 4 216 - -
Lal20g0427 220 CDD GST_N_Tau 7 80 - -
Lal20g0427 220 Pfam Glutathione S-transferase, C-terminal domain 126 190 - -
Lal20g0427 220 PANTHER GLUTATHIONE S-TRANSFERASE, AMINO-TERMINAL DOMAIN PROTEIN 6 214 - -
Lal20g0427 220 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 5 84 IPR004045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g0427 Lal-Chr20 3463957 3466322 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal20g0427 1 216 Glutathione S-transferase Gene Family AT1G17180 60.185 1.94e-95 276
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal20g0427 20 3463957 3466322 Lal20g0427 20 3463957 3466322 ECH