Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g0416 ATGTTATCCAAATCACCAACAGAACAATACACTTATGTCAAGAACTGCAAAGAAACCACATTCTTTTCAGGAATTCCTCTAGTGGACCTATCCAAACCAGATGCAAAGAGTCTCATAGTGAATGCATGTGAAGAATTTGGATTCTTCAAAGTCATAAACCATGGAGTTTCCATGGAAGCTATATCAAAGTTGGAATGTGAAGCCATGAACTTTTTCTCTCTTCCACTCATTGAGAAAGAAAAAGCAGGTCCTGCAAATCCATTTGGCTATGGTAACAAGAGTATTGGACATAATGGTGATGTTGGTTGGCTTGAATATCTTCTTCTCTCAACTAATCTAGAATACAATTCTCCAACACTTTCCTCTGCTTTTGGACAGAACAATGAGAACTTTAGGAGTGTGTTAGATGATTATATGTGTGGTGTGAGGAAGATGGCATGTGAGATTCTTGATTTTATGGCAGAAGGAATGAACATTCAGCCAAAGAATGTGTTTAGTAAGCTTCTAATGGACAAACACAGTGACTCTCTTTTCAGGATGAATCACTACCCAGCATGCCCTCAGCAAGGTGATGATGAAAACATCATTGGCTTTGGAGAACACACTGACCCACAAATCATTTCTTTATTGAGATCAAATAACACTTCTGGCCTCCAAATTTCTCTTAGGGATGGGACCTGGATTTCAGTCCCACCTGATCATACTTCATTCTTCATCAATGTTGGTGATTCTCTCCAGGTTATGACCAATGGACGATTCAGGAGTGTGAGGCATAGGGTTGTAGCAAATGGGTTGAAATCAAGGCTTTCAATGATTTACTTCGTTGGTCCACCTCTGAGTGAAAAGATTGCACCATTGCCTTCTCTTATGAAAGGAAAAGAAAGTTTATACAAAGAGTTTACATGGTTCGAGTACAAAAATTCAAATTATGGTTCAAGATTGGCTGATAATAGGCTTGGACACTTTGAGAGAATTGCAGCCTCATAA 987 0.3891 MLSKSPTEQYTYVKNCKETTFFSGIPLVDLSKPDAKSLIVNACEEFGFFKVINHGVSMEAISKLECEAMNFFSLPLIEKEKAGPANPFGYGNKSIGHNGDVGWLEYLLLSTNLEYNSPTLSSAFGQNNENFRSVLDDYMCGVRKMACEILDFMAEGMNIQPKNVFSKLLMDKHSDSLFRMNHYPACPQQGDDENIIGFGEHTDPQIISLLRSNNTSGLQISLRDGTWISVPPDHTSFFINVGDSLQVMTNGRFRSVRHRVVANGLKSRLSMIYFVGPPLSEKIAPLPSLMKGKESLYKEFTWFEYKNSNYGSRLADNRLGHFERIAAS 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g0416 328 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 173 277 IPR005123 -
Lal20g0416 328 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 5 325 - -
Lal20g0416 328 PRINTS Isopenicillin N synthase signature 39 56 - -
Lal20g0416 328 PRINTS Isopenicillin N synthase signature 201 222 - -
Lal20g0416 328 PRINTS Isopenicillin N synthase signature 237 263 - -
Lal20g0416 328 Pfam non-haem dioxygenase in morphine synthesis N-terminal 25 118 IPR026992 -
Lal20g0416 328 PANTHER GIBBERELLIN 2-OXIDASE 5 325 - -
Lal20g0416 328 SUPERFAMILY Clavaminate synthase-like 9 316 - -
Lal20g0416 328 Gene3D - 2 314 IPR027443 -
Lal20g0416 328 Pfam 2OG-Fe(II) oxygenase superfamily 175 277 IPR044861 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g0416 Lal-Chr20 3341463 3345235 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal20g0416 28 281 Glycosyltransferase AT5G59530 26.515 5.40e-21 90.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal20g0416 20 3341463 3345235 Lal20g0416 20 3341463 3345235 ECH
Lal20g0416 20 3341463 3345235 Lal11g1496 11 18182167 18184187 LSH