Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g0408 ATGACCGAAGAAGACAAACCCGCCGTCGTCCTCCACCACCACCACCAACCTCCGCCACTATCCTACCCTCAGCCCTATCCTCCTCCTCAATATGGCACCTTCCAAGGCGTTTCCAACTACCCTCCTCCACCGCCGGACCTTCACCCCGCCATCGGCTTCCCCCAACCGGCCCCGCCACACGGATTCACCAACCAATCACCACCTCCTCCGCCGTACTACACTCATGGTTACCAAGCAGTTCCCGGTTATGCAGTTGCTGAAGGAAGACCTGTAAGCGAACGCCGCCTTCCTTTCTGTGGTCTTGGTTGCGGCTGGTTCCTGTTTATGTTTGGTTTCTTGCTTGCTGGTATTCCATGGTATGTTGGAGCAATACTTATGCTTTGTTCCAGAGTAGACTATCGAGAGAAACCGGGATATGTTGCTTGTATAGTTGCTGTTCCATCTCAAAACCAATTGGCTATGGGAGGAGTAGCCCCACAGGCTGTTCTGTATGCAATTGCAATTATTTTTGGTGTGACAAAGGGTGGAGATGACTAG 537 0.5233 MTEEDKPAVVLHHHHQPPPLSYPQPYPPPQYGTFQGVSNYPPPPPDLHPAIGFPQPAPPHGFTNQSPPPPPYYTHGYQAVPGYAVAEGRPVSERRLPFCGLGCGWFLFMFGFLLAGIPWYVGAILMLCSRVDYREKPGYVACIVAVPSQNQLAMGGVAPQAVLYAIAIIFGVTKGGDD 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g0408 178 PANTHER 60S RIBOSOMAL PROTEIN L18A-LIKE 2 175 IPR044804 -
Lal20g0408 178 MobiDBLite consensus disorder prediction 1 25 - -
Lal20g0408 178 PANTHER 60S RIBOSOMAL PROTEIN L18A-LIKE 2 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g0408 Lal-Chr20 3273985 3277997 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal20g0408 31 173 Cytoplasmic Ribosomal Protein Gene Family AT1G29970 34.715 1.48e-22 87.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal20g0408 20 3273985 3277997 Lal20g0408 20 3273985 3277997 ECH