Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g1579 ATGGATATAACAGAAGTTTCAATCTTGCATCATGTGGCAATCATGATAATGGGGATTTGGCTTTTGTCTGCTTACAATTTGTGTCACCCTCTTGTTTATTTTACAGCATTGATGTATCTTTATCTGGTTCATGAGCGTTATGTTATGAAGCTGAGGAGGAAAATGCAGTTTGAGGAGAGGAAAAAATCTTATCAAAGAAAGGTACTTTCTGATTTTGAAACAGTTCGGTGGTTGAACCATGCAATTAAGAATATATGGCCTATATGTATGGAGCAGATAGCCTCTCAGAATATTTTGCTCCCTATCATACCATGGTTCTTAGAGAAGTACAAGCCTTGGACTGCTAAAGAAGCTGTTGTTCAGCACCTTTACTTAGGAAAAAATCCACCTTTGATTACTGAAATGAGGGTACTTCGTAAGAGTAATGATGACCACTTGGTTCTGGAGTTAGGAATGAATTTTCTCACAGCTGATGATATGAGTGCAATACTTTCTGTCAAACTAAGAAAAAGATTGGGCTTTGGAATGACAGCAAAGCTTCACATAACAGGAATGCATGTTGAAGGAAAGGTGTTGGTTGGGGTGAAGTTTATCCAGGCAAGGCCTTTCATTAGTCGTGTGCGTGTATGCTTTGTCGAACCTCCATATTTTCAAATGACTGTCAAACCTATATTTACTCATGGACTTGATGTAACAGAACTTCCAGGGATTGCTGGGTGGCTAGATAAGATTTTGTCCATTGCTTTTGAACAGACTCTTGTTGAGCCCAATATGCTGGTTGTTGATGTTGAGAAATTTATCTCACCACAGGCAGAGCATTGGTTCTCTGTGGATGAGAAGGACCCAGTTGCTTATGCGAAAGTCGAGGTTATTGAAGCATCTGATTTGAAGCCAGAAGATCTAAATGGATTACTAGATCCTTATGTGAAGGGTCATTTGGGAGGATACAGATTGAGGACTGATATACAAAAGAAAACAGTTACTCCAAAATGGCATGAAGAATTTAGAATTCCCATCATAACATGGGAGTGTAACAATGTGCTGGCTATTAAAGTTTGCGACAAGGACCGTTTCTACGATAACACCCTTGGGTTTGTTTCAGTATTCGAACTTCGTATTTTGTCCTATGTTGTTTCTTATCTACAACTTGATCTTGCACTCTTTTGCAGTATATTATGGAACTGTTCTGTGAACATCAGTGGTTTGAGGGATGGCCAAAGACATGATATGTGGCTGCCGCTTGAAAACATAAAATCGGCGAGGTTGCATCTGGCAATAACTATTCTTGAGGACAACGGAAAGGAGGAAACAGTGGACGTTGAAGAAAGGAAAAATTCCCCTGCCAATGACACTTCTAACAAAAGTTCCATCGTCAATGACTCTACTATAGAAAATTCCTTCCCATCCACTCAACCCGAAAAATCTCCAGAAGTGACAGAAAGAAAAAATTCCTTTGCCAATGACACCTCTAACAAAAGTTCCTTTGGCGAAGACTCTACTAATAAAAATTCCTTCTCGTCCACTCAATCCGAAAAAGATAGGGAGGTGGCAGATGACTATGAGCCTATAGATGTCGAAGGGCAAAAGGAGACAGGAATTTGGATTCACCACCCAGGAAGTGAAGTTTCCGAAACTTGGAAGCCGAGGAAAGGGAAGAGCAGACGCCTTGATACTGAAATTCGCAAGGAGCCTAATGGTTCATTTGGAAGTTTTAATTCATCAACATCTGAACATTTGTATAATGACTGCAGCAGTCCGGATAGTAATCCAAAAGATACGAATCGAATGAAATCCGTTAAGAAGGGCTTGCACAAGATTGGTACAATATTTTGCAGGAACCATAAAAAGGAGGATCAGTTAAATTGTGTTGAAGAGGAGGTCCCATCCCAACATGACAACATCAGGTTAGTCAAGGCCAAGGGAGGAATTGGGGTGAAGCTTGTCATGGAAGAAAACATTTCTGGCTTTTCCACTGGTAAGCTTCAGGCAGAGGCCGGATCGAATGAAGGGAGTGGTTCTGAGAGCCCTGGCAAGGGAAATGTTAAGGATATGGCAAAGAATATTTTTAAACATGCAGGAAAATCAGCTCTGGGCTTCAAGCATGTTTTTTCCGGTAAATCAAAGAAATCAAAAGCTGATACGGCGGCCTTAGAAAGAAAAACATTTGATGAATCTGACTCTTTCGATGATGACGAATCCCTACTTCAGTCGCCTATAGGTGAAAGAATTCCGGTTGCTACCCAGGACATGGTCTCATCCAGCAATGGTTCTCCGAAGTCCAAGGTAATTGTTGTTCAGACAGTTCCATCTATAACTACCGTGGATAACGAAACTCCATCGATGAAGACTTAG 2352 0.4077 MDITEVSILHHVAIMIMGIWLLSAYNLCHPLVYFTALMYLYLVHERYVMKLRRKMQFEERKKSYQRKVLSDFETVRWLNHAIKNIWPICMEQIASQNILLPIIPWFLEKYKPWTAKEAVVQHLYLGKNPPLITEMRVLRKSNDDHLVLELGMNFLTADDMSAILSVKLRKRLGFGMTAKLHITGMHVEGKVLVGVKFIQARPFISRVRVCFVEPPYFQMTVKPIFTHGLDVTELPGIAGWLDKILSIAFEQTLVEPNMLVVDVEKFISPQAEHWFSVDEKDPVAYAKVEVIEASDLKPEDLNGLLDPYVKGHLGGYRLRTDIQKKTVTPKWHEEFRIPIITWECNNVLAIKVCDKDRFYDNTLGFVSVFELRILSYVVSYLQLDLALFCSILWNCSVNISGLRDGQRHDMWLPLENIKSARLHLAITILEDNGKEETVDVEERKNSPANDTSNKSSIVNDSTIENSFPSTQPEKSPEVTERKNSFANDTSNKSSFGEDSTNKNSFSSTQSEKDREVADDYEPIDVEGQKETGIWIHHPGSEVSETWKPRKGKSRRLDTEIRKEPNGSFGSFNSSTSEHLYNDCSSPDSNPKDTNRMKSVKKGLHKIGTIFCRNHKKEDQLNCVEEEVPSQHDNIRLVKAKGGIGVKLVMEENISGFSTGKLQAEAGSNEGSGSESPGKGNVKDMAKNIFKHAGKSALGFKHVFSGKSKKSKADTAALERKTFDESDSFDDDESLLQSPIGERIPVATQDMVSSSNGSPKSKVIVVQTVPSITTVDNETPSMKT 783
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g1579 783 MobiDBLite consensus disorder prediction 565 592 - -
Lal1g1579 783 MobiDBLite consensus disorder prediction 449 474 - -
Lal1g1579 783 MobiDBLite consensus disorder prediction 435 595 - -
Lal1g1579 783 Pfam C2 domain 287 367 IPR000008 -
Lal1g1579 783 CDD C2 287 368 - -
Lal1g1579 783 MobiDBLite consensus disorder prediction 508 526 - -
Lal1g1579 783 ProSiteProfiles Synaptotagmin-like mitochondrial lipid-binding proteins (SMP) domain profile. 71 264 IPR031468 GO:0008289
Lal1g1579 783 MobiDBLite consensus disorder prediction 542 562 - -
Lal1g1579 783 Gene3D C2 domain 269 430 IPR035892 -
Lal1g1579 783 ProSiteProfiles C2 domain profile. 269 385 IPR000008 -
Lal1g1579 783 PANTHER C2 DOMAIN-CONTAINING PROTEIN-LIKE 390 752 - -
Lal1g1579 783 PANTHER C2 DOMAIN-CONTAINING PROTEIN-LIKE 1 368 - -
Lal1g1579 783 SMART C2_3c 285 385 IPR000008 -
Lal1g1579 783 MobiDBLite consensus disorder prediction 482 507 - -
Lal1g1579 783 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 278 430 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g1579 Lal-Chr1 18180800 18188260 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g1579 278 366 Lipid Metabolism Gene Families AT3G61300 32.584 3.41e-07 52.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g1579 1 18180800 18188260 Lal1g1579 1 18180800 18188260 ECH
Lal11g1490 11 18100268 18106554 Lal1g1579 1 18180800 18188260 LSH