Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g1568 ATGGAGATAACAAATGTGACTGAGTATGAGGCTATTGCAAAGCAGAAATTGCCAAAGATGGTGTATGACTACTATGCATCTGGTGCTGAGGACCAATGGACTCTGCAAGAAAACAGAAATGCCTTTTCCAGAATTTTATTCCGACCGCGGATTCTTATCGATGTGAGCAAGATAGACCTTACAACTACTGTCCTTGGCTTCAAGATATCCATGCCAATCATGCTTGCTCCAACAGCTATGCAGAAAATGGCTCATCCTGAAGGAGAATATGCAACTGCAAGAGCTGCATCTGCAGCTGGAACAATCATGACATTGTCTTCATGGGCTACTTCAAGTGTTGAAGAGGTAGCTTCAACAGGACCAGGCATTCGATTTTTCCAGCTATATGTGTACAAGGACAGAAATGTTGTTGCTCAACTTGTGAGAAGAGCTGAAAAAGCTGGATTCAAAGCCATTGCCCTCACTGTTGATACCCCAAGGCTAGGACGCAGAGAAGCTGATATCAAGAACAGATTCACTTTGCCACCATTTTTGACATTGAAGAACTTTGAAGGTTTGGACCTTGGAAAGATGGACGAAGCTTCTGATTCTGGACTTGCTTCATATGTTGCTGGTCAAATTGATCGTACTCTAAGCTGGAAGGATGTGCAGTGGCTTCAGACAATCACCAAGCTGCCAATTCTGGTGAAGGGTGTGCTGACTGCTGAGGATACAAGGCTAGCAGTACAAGCTGGTGCAGCTGGAATAATAGTGTCCAATCATGGAGCTAGACAACTTGATTATGTCCCAGCCACTATTACTGCCTTGGAAGAGGTGGTTAAAGCTGCTCAAGGTAGAGTTCCTGTATTTTTGGATGGTGGTGTTCGCCGTGGAACTGATGTGTTCAAGGCATTGGCATTGGGTGCCTCTGGAATATTTATTGGACGCCCTGTGGTATTCTCCTTGGCCGCGGAAGGGGAAAGTGGTGTAAGAAAAGTACTTCAAATGCTACGTGATGAGTTTGAGTTAACCATGGCCTTAAGTGGGTGTCGTTCACTGAAGGAAATTACTCGTGATCACATAGTCACAGATTGGGATCTTCCTCGTGTATCACCAAGATTATGA 1104 0.4466 MEITNVTEYEAIAKQKLPKMVYDYYASGAEDQWTLQENRNAFSRILFRPRILIDVSKIDLTTTVLGFKISMPIMLAPTAMQKMAHPEGEYATARAASAAGTIMTLSSWATSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAEKAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFEGLDLGKMDEASDSGLASYVAGQIDRTLSWKDVQWLQTITKLPILVKGVLTAEDTRLAVQAGAAGIIVSNHGARQLDYVPATITALEEVVKAAQGRVPVFLDGGVRRGTDVFKALALGASGIFIGRPVVFSLAAEGESGVRKVLQMLRDEFELTMALSGCRSLKEITRDHIVTDWDLPRVSPRL 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g1568 367 Gene3D Aldolase class I 1 366 IPR013785 -
Lal1g1568 367 PANTHER ALPHA-HYDROXY ACID DEHYDROGENASE, FMN-DEPENDENT, ALDOLASE-TYPE TIM BARREL-RELATED 1 364 - -
Lal1g1568 367 PANTHER S -2-HYDROXY-ACID OXIDASE-RELATED 1 364 - -
Lal1g1568 367 CDD alpha_hydroxyacid_oxid_FMN 8 351 IPR012133 GO:0010181|GO:0016491
Lal1g1568 367 SUPERFAMILY FMN-linked oxidoreductases 2 356 - -
Lal1g1568 367 PIRSF Al-hdrx_acd_dh 1 358 IPR012133 GO:0010181|GO:0016491
Lal1g1568 367 SMART IMPDH_2 40 355 - -
Lal1g1568 367 ProSitePatterns FMN-dependent alpha-hydroxy acid dehydrogenases active site. 252 258 IPR008259 GO:0016491
Lal1g1568 367 ProSiteProfiles FMN-dependent alpha-hydroxy acid dehydrogenase domain profile. 1 359 IPR037396 -
Lal1g1568 367 Pfam FMN-dependent dehydrogenase 13 355 IPR000262 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g1568 Lal-Chr1 18044140 18052519 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g1568 1 18044140 18052519 Lal1g1568 1 18044140 18052519 ECH