Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g1555 ATGTCTTCAACTTTCAACTCTTCAAATTCATTGTATGACTTTGTTGTAAAAGATGGAAATGGTGTGAAAGGTATTGTAGACTCAGGCATAAAAGAAGTGCCAGAGAGATACATACAACCCCCACATGAACAAATCAACAAACTAGAATCAAGGACACATGTTGTGCCACCCATTGACTTATCTAAGCTCAATGGACCTGAACATGACCTAGTTGTGGACCAGATTGTTAGTGCTTCTGAGACTCTTGGCTTTTTTCAGGTAATAAATCATTGTGTACCTGTTGAGTTATTGGAATCACTCAAAAATTCAGCACACACATTCTTCAACTTGCCACCAGAGAAGAAAGCTATTTACCTAAAAGGGTTGAGCCCAAGTCCATTTGTAAAATATGGAACTAGCTTTGTGCCTGAGAAAGAAAAGTCATTGGAATGGAAAGATTATATTAGTATGATATATAGTAATGATGAAGAAGCTCTTCAATATTGGCCTAATCAATGCAAGGAAGTTGCACTAGAATATTTGAAGTTATCAACAAAGATTGTTAGAGAGTTGGTGGAAATATTGATGGGTAAGCTTGGAGTGAAAGTAGAAGAGTCAAAAATGGAGGGGATTCTTGGGATGAGAGTGGTGAACATGAACTATTACCCACCATGTCCAAATCCTGAACTCACAGTTGGTGTAGGTCGCCATTCAGATATGGGAGCTATTACAGTGTTACTCCAAGATGGCATAGGTGGCCTTTATGTCAAAGTTGATGGTGAAGATCAACATTCTCAAAATGAACAGTGGCTTGAAATTCCACCAATCCATGGTGCTCTAGTTATCAATATTGGTGATGCTTTACAGATACTAAGCAATGGGAAGTATAAGAGTGCTGAACACAGAGTGAGGACAACAAACACTGAATGTAGAGTATCTGTTCCAGTTTTTACACTGCCAAAACCCACTGAGAAGATTGAGCCACTGCCAGAGGTGGTGAAGAAAGATGGGTTAGCCCGTTATAGAGAAATTGTGTTCCAAGATTACATGAAAAACTTCTTTGAGAATGTTCATGTAGGAAAAAAGTCTCTTGATTTTGCAAGGATCAACTCTACCTAA 1098 0.3852 MSSTFNSSNSLYDFVVKDGNGVKGIVDSGIKEVPERYIQPPHEQINKLESRTHVVPPIDLSKLNGPEHDLVVDQIVSASETLGFFQVINHCVPVELLESLKNSAHTFFNLPPEKKAIYLKGLSPSPFVKYGTSFVPEKEKSLEWKDYISMIYSNDEEALQYWPNQCKEVALEYLKLSTKIVRELVEILMGKLGVKVEESKMEGILGMRVVNMNYYPPCPNPELTVGVGRHSDMGAITVLLQDGIGGLYVKVDGEDQHSQNEQWLEIPPIHGALVINIGDALQILSNGKYKSAEHRVRTTNTECRVSVPVFTLPKPTEKIEPLPEVVKKDGLARYREIVFQDYMKNFFENVHVGKKSLDFARINST 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g1555 365 Pfam 2OG-Fe(II) oxygenase superfamily 211 311 IPR044861 -
Lal1g1555 365 PANTHER OXIDOREDUCTASE, 2OG-FE II OXYGENASE FAMILY PROTEIN 4 353 - -
Lal1g1555 365 Gene3D - 10 345 IPR027443 -
Lal1g1555 365 SUPERFAMILY Clavaminate synthase-like 21 349 - -
Lal1g1555 365 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 203 313 IPR005123 -
Lal1g1555 365 Pfam non-haem dioxygenase in morphine synthesis N-terminal 55 165 IPR026992 -
Lal1g1555 365 PANTHER SCOPOLETIN 8-HYDROXYLASE 4 353 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g1555 Lal-Chr1 17873027 17874938 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g1555 21 362 Glycosyltransferase AT5G59530 33.618 2.30e-58 191
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g1555 1 17873027 17874938 Lal1g1555 1 17873027 17874938 ECH