Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g1536 ATGATGCTAGGTAGTGGACAATTAACAGTTCCTCCAGGCTTCAGGTTCCACCCTACTGATGAAGAGCTTCTCTACTATTACCTGAGGAAGAAAGTTTCTTATGAAGCAATTGACCTTGATGTCATAAGAGAAGTAGATCTGAACAAACTTGAGCCTTGGGACCTCACAGATAAATGTAGTATTGGTTCAGGGCCTCAGAATGAGTGGTATTTCTTCAGCCACAAGGACAAGAAGTATCCGACCGGAACCCGAACAAATCGAGCAACAACGGTTGGTTTTTGGAAAGCTACCGGAAGAGACAAGGCCATTTACCATAGCAATTCCAAGAGAATTGGAATGAGGAAAACCCTAGTGTTCTACACCGGTCGCGCTCCTCATGGCCACAAAACTGAGTGGATCATGCATGAGTATCGCCTTGATGAAGATGATGCTGAGATTCAGGAAGATGGGTGGGTGGTCTGCAGGGTTTTCAAGAAGAAAAACCAAAACAGATGTTACCAACAAGAAATTGAAGAAGAAGAGCACTTCACCAATATGAGAACAACTGGCCCATCCCAAATTCTAGAGCCAAAACATCATCACATACAAGGACTATATGATTACAATAACTTTGATGGATCAATTCACCTGCCACAGCTATTCACTTCAGAAACAACTATAGCACCAATTCCTTCCATGGCTTCAACCATGAATACCATGGATATTCTTGAGTGCTCTCAAAACTTGTTGAGGCTCACAACAACATCTAACTGTAGACTTAATCTTATGCAGCAACAACAAGGAGAGAGGTTCAATGGTGACTGGTCATTCTTGGATAAACTCCTTGCTTCCCACAATAGTAACCCTCCTACCCATCAAGGTGCTGCTGCTAGTTCTGCTCAGAAATTTCCATTTCATTACCTTGGCTGTGACACACAGGATATTATGAAATTTTCCAAGTAG 942 0.4246 MMLGSGQLTVPPGFRFHPTDEELLYYYLRKKVSYEAIDLDVIREVDLNKLEPWDLTDKCSIGSGPQNEWYFFSHKDKKYPTGTRTNRATTVGFWKATGRDKAIYHSNSKRIGMRKTLVFYTGRAPHGHKTEWIMHEYRLDEDDAEIQEDGWVVCRVFKKKNQNRCYQQEIEEEEHFTNMRTTGPSQILEPKHHHIQGLYDYNNFDGSIHLPQLFTSETTIAPIPSMASTMNTMDILECSQNLLRLTTTSNCRLNLMQQQQGERFNGDWSFLDKLLASHNSNPPTHQGAAASSAQKFPFHYLGCDTQDIMKFSK 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g1536 313 Pfam No apical meristem (NAM) protein 11 139 IPR003441 GO:0003677|GO:0006355
Lal1g1536 313 SUPERFAMILY NAC domain 4 159 IPR036093 GO:0003677|GO:0006355
Lal1g1536 313 ProSiteProfiles NAC domain profile. 10 159 IPR003441 GO:0003677|GO:0006355
Lal1g1536 313 Gene3D NAC domain 19 164 IPR036093 GO:0003677|GO:0006355
Lal1g1536 313 PANTHER PROTEIN SOMBRERO 6 284 - -
Lal1g1536 313 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 6 284 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g1536 Lal-Chr1 17569558 17573854 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lal1g1536 NAM 5.5e-38 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g1536 1 17569558 17573854 Lal1g1536 1 17569558 17573854 ECH