Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g1535 ATGAAGTATGTGTTGGTAACAGGTGGTGTTGTTAGTGGACTTGGGAAAGGGGTAACTGCTAGTAGTATTGGGGTTCTACTGAAGGCATGTGGTCTTAGAGTTACTTCTATCAAGATTGATCCCTACCTGAACACTGATGCAGGGACTATGTCTCCTTTTGAGCATGGGGAGGTGTTTGTCTTAGATGACGGCGGTGAGGTTGACCTTGATCTTGGAAACTATGAACGTTTCTTGGACATCAAATTAACCCGTGATAATAATATCACTACCGGAAAAATATATCAGTCTGTTATTGAGAAGGAGAGAAGAGGAGATTATCTCGGAAAGACTGTCCAGGTTGTTCCACACATAACTGATGCCATCCAAGATTGGATAGAGCGTGTTGCAAGGATACCAGTCGATGGGAAAGAAGAACCAGCCGATGTTTGTGTCATCGAATTAGGTGGAACCATAGGGGATATTGAGTCTATGCCTTTTATTGAAGCACTCGGCCAATTTTCCTACCGTGTAGGCCCCGGCAACTTCTGTTTGATTCATGTCAGCCTAATTCCGGTACTTAATGTTGTTGGCGAACAGAAAACAAAGCCAACTCAGCACAGTGTTCGACAACTTAGAGGATTAGGTTTGACCCCTAACCTTCTTGCTTGTCGCAGCACAAAGGAACTTGACGATAATGTTAAGGCAAAACTTGCTCAATTTTGCCATGTCCCGTTGTCAAACATAGTTGCTCTCCATGATGTTCCAAATATTTGGCACATTCCTTTGCTATTAAAAGACCAGAAAGCGCATGAGGCAATCCTGAAGGCTCTAGACATGCTAAGTGTTACTACAGAGCCTAATTTGAAGGACTGGATCACCACGACAAAAGTTTACAACGACTGTCATGAAAATTGCCAAGTGTTGGTCTCACAATTGTTCTGTGCTTCACAGGTCAGAATTGCGATGGTAGGAAAATACACCGGCCTTTCTGATGCATATCTTTCTGTTCTGAAGGCACTTTTACATGCTGCTGTTGCACGCGACCGTAAACTTATTGTGGACTGGGTTCCAGCTGGCGATCTTGAAGACGTTACTTCTGAACAGGATCCTGACGCATACAAAGCAGCTTGGGAACTTCTGAAGGGTGCTCATGGGGTTCTAGTTCCAGGTGGTTTTGGTGATAGAGGAGTGCAGGGGAAAATTCTTGCTGCAAAGTATGCTCGAGAAAATAATGTCCCATATCTCGGCATTTGCTTGGGAATGCAAATTGCTGTCATTGAGTTTGCGCGATCGATCCTTGGTCTGCGTGATACTACTAGCACGGAATTTGATCCTGAGGCCAAGAACCCTTGTGTCATATTTATGCCAGAAGGTTCAAAGACTCATATGGGAGGAACCATGCGTCTTGGTTCAAGGAGAACTTACTTCCAAGTTGCCGATTGCAAATCTGCACAGTTGTATGGTAATGTAAGCTTTGTTGATGAGAGACATCGGCATAGATATGAGGTTAACCCTGACATGATATCACAGCTAGAGAGTGCGGGTCTATCTTTTGTTGGCAAAGATGAAACTGGGAGTCGCATGGAGATAGTTGAACTGCCCAGCCATCCTTTTTTTATCGGCGTTCAGTTTCACCCCGAGTTTAAGTCCAGACCAGGGAAACCTTCTCCCGTCTTCTCAGGATTAATAGCTGCAGCATGTGAACTGAAGAGGACAGTCATGTCACCAAACTATGGCCACACCAAGTTAACCAATGGAATATATAATGGACACTCACAAGTACTGAAATCACACCAAAATGGAAAGAGCTTCAAAACAACCAATGGCTCCTTGAATGGTATATATATGAATGGCAATGGCGTGCATGTAGACGGCAGTGTTTAG 1863 0.4412 MKYVLVTGGVVSGLGKGVTASSIGVLLKACGLRVTSIKIDPYLNTDAGTMSPFEHGEVFVLDDGGEVDLDLGNYERFLDIKLTRDNNITTGKIYQSVIEKERRGDYLGKTVQVVPHITDAIQDWIERVARIPVDGKEEPADVCVIELGGTIGDIESMPFIEALGQFSYRVGPGNFCLIHVSLIPVLNVVGEQKTKPTQHSVRQLRGLGLTPNLLACRSTKELDDNVKAKLAQFCHVPLSNIVALHDVPNIWHIPLLLKDQKAHEAILKALDMLSVTTEPNLKDWITTTKVYNDCHENCQVLVSQLFCASQVRIAMVGKYTGLSDAYLSVLKALLHAAVARDRKLIVDWVPAGDLEDVTSEQDPDAYKAAWELLKGAHGVLVPGGFGDRGVQGKILAAKYARENNVPYLGICLGMQIAVIEFARSILGLRDTTSTEFDPEAKNPCVIFMPEGSKTHMGGTMRLGSRRTYFQVADCKSAQLYGNVSFVDERHRHRYEVNPDMISQLESAGLSFVGKDETGSRMEIVELPSHPFFIGVQFHPEFKSRPGKPSPVFSGLIAAACELKRTVMSPNYGHTKLTNGIYNGHSQVLKSHQNGKSFKTTNGSLNGIYMNGNGVHVDGSV 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g1535 620 SUPERFAMILY Class I glutamine amidotransferase-like 310 563 IPR029062 -
Lal1g1535 620 ProSiteProfiles Glutamine amidotransferase type 1 domain profile. 312 565 - -
Lal1g1535 620 CDD CTPS_N 2 268 IPR017456 GO:0003883|GO:0006221
Lal1g1535 620 CDD GATase1_CTP_Synthase 311 556 IPR033828 GO:0003883|GO:0006241
Lal1g1535 620 PANTHER CTP SYNTHASE 1 587 IPR004468 GO:0003883|GO:0006221
Lal1g1535 620 PANTHER CTP SYNTHASE 1 587 - -
Lal1g1535 620 Gene3D - 1 292 IPR027417 -
Lal1g1535 620 Pfam Glutamine amidotransferase class-I 322 557 IPR017926 -
Lal1g1535 620 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 272 IPR027417 -
Lal1g1535 620 Hamap CTP synthase [pyrG]. 1 563 IPR004468 GO:0003883|GO:0006221
Lal1g1535 620 Pfam CTP synthase N-terminus 2 272 IPR017456 GO:0003883|GO:0006221
Lal1g1535 620 TIGRFAM PyrG: CTP synthase 1 558 IPR004468 GO:0003883|GO:0006221
Lal1g1535 620 Gene3D - 307 571 IPR029062 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g1535 Lal-Chr1 17529505 17536617 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g1535 1 17529505 17536617 Lal1g1535 1 17529505 17536617 ECH
Lal11g1565 11 18690780 18703917 Lal1g1535 1 17529505 17536617 LSH
Lal1g0641 1 4164111 4178417 Lal1g1535 1 17529505 17536617 PCT