Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g1214 ATGTTTGAAGCTACAATGGAGAAGATGGGGTTGAATTCAAAGAATAGACTCACAACATTCTTTGTTGTAATTTTCATAGCTTTCCCTATTGTTTTCACTGTTACCATGAAATTAAGAAACTCAAGTTTCACAATCCTTGAAGGGAAATCTGAAAACAAGGTACTAGAAGGTGAAATAGGTCAGAAAAACATTACATTTGAGTTGTTGAATGGAAAGTTAAACGTTACAAAAAATGGATCAAGAAGGGTCCAAAATGTAACACATGAAAACTCAGAGGGGAAAATTGAAAGTGGAACAGACCCTATTGAAGGAAGAACTACATGTGGGAAAATAGTAGCATCAGAAGAAGGGCACAAAAATGCTTCATTGACAAGTTCAACAAATGATTCAACCCCACATACTGCAAATCCTATTGACAAAGACAAAAGTGCTTCATTACCAAGTTCAACAAATTACTCAAGTTCAATTTTGATTCATAATGAGAAAGACAAGTTACTAGGTGGACTTTTGGCTTCTGGATTTGATGAAGTCTCATGCATAAGCAGGCTTCAGTCTCACACATTCCGCAAAGTTTCTCCTCACAAGCCTTCTCAATATCTGATATCGAAACTGCGCGATTACGAAGAACTTCATGGTAAGTGTGGACCTGATACTAGAGCTTATAAGAGAAACTTGAAGCATCTACAATCTAAGAAATATATTGGAGCTGCAATGTGTAAATACATTGTTTGGGATCCTTCAAATGGCTTAGGGAACCAAATGATTAGCATAGTTTCAGCATTTCTTTATGCTATTCTCACACATAGAGTCCTACTTGTAAGATTTGGTACAGATCTGAATGACCTATTTTGCGAGCCGTTTCTTAATTCGACTTGGGTATTGCCTAAGAATACTCCATTTTGGAATGAAAGGCGTGTAGAGACATATCAGACTATGCTAAAGAAGGACAAGGCTAATAGCAACCCAAAAGAGGCATTACCATCAACTTTGTTTCTAAATCTTCAACACACCCTTGATGATCCCGAGAAACTTTTCCATTGTGATCATAGTCAAGATCTTCTAAGGAACATTCCTTTGTTGATTTTACAGTCAGATCAATATTTTGTCCCTTCTTTGTTCATGAATCCATCTTTCAACTTGGAGATTAACAAAATGTTCCCCGAAAAGGACACGATTTTCCACCACTTGGCGCGCTATCTTTTCCACCCTTCAAATGAGGCATGGGGACTAATAAGCAGATTCTATCAAACATACTTGGCCGAAGCAGACGAGAGAATTGGCCTTCAGATAAGAGTATTTAGTCCTAATACTACTCCAATGCAAGCAATTATGGACCTAGTTCTAAATTGCACCATAAGTAATAAGCTGCTGCCGGAACTCGATACAAAAAATTCAGTGTCTTATAGTCCAAACAAGACTCTAAAGGCTGTTCTAGTAGCATCTTTATATCCAGAGTATGGTGAGAGCTTAATGGCTATGTACTTAGATAGACCAAGTATTAGTGGAGAACTAATTGGAGTTTATCAACCAAGCCATGAAGAGAAACAAAAGTTTCATGATAACATGCATAATATGAAGGCATGGACTGAAATGTATTTACTAAGTTTATCTGATGTATTGGTCACTACTTCTCTATCAACTTTTGGGTATGTGGCACAAGGCTTAGGAGGTTTGAAACCATGGCTTCTTTACAAGTTGATTAGTAATGATACTCATTTTCCAGCATGTGAAAGGGATTTCTCATTTGAGCCTTGTAATCATATTCCTCCAAAGCATTACTGCAATGGTAAGGCTATAAAGGATTATGCTTCTTCTTTCCCTATTTTGAGAGAATGCATTGATTATTCTAATGGAGTGAAGCTGGTTAATGATTCTACTATATAA 1884 0.3684 MFEATMEKMGLNSKNRLTTFFVVIFIAFPIVFTVTMKLRNSSFTILEGKSENKVLEGEIGQKNITFELLNGKLNVTKNGSRRVQNVTHENSEGKIESGTDPIEGRTTCGKIVASEEGHKNASLTSSTNDSTPHTANPIDKDKSASLPSSTNYSSSILIHNEKDKLLGGLLASGFDEVSCISRLQSHTFRKVSPHKPSQYLISKLRDYEELHGKCGPDTRAYKRNLKHLQSKKYIGAAMCKYIVWDPSNGLGNQMISIVSAFLYAILTHRVLLVRFGTDLNDLFCEPFLNSTWVLPKNTPFWNERRVETYQTMLKKDKANSNPKEALPSTLFLNLQHTLDDPEKLFHCDHSQDLLRNIPLLILQSDQYFVPSLFMNPSFNLEINKMFPEKDTIFHHLARYLFHPSNEAWGLISRFYQTYLAEADERIGLQIRVFSPNTTPMQAIMDLVLNCTISNKLLPELDTKNSVSYSPNKTLKAVLVASLYPEYGESLMAMYLDRPSISGELIGVYQPSHEEKQKFHDNMHNMKAWTEMYLLSLSDVLVTTSLSTFGYVAQGLGGLKPWLLYKLISNDTHFPACERDFSFEPCNHIPPKHYCNGKAIKDYASSFPILRECIDYSNGVKLVNDSTI 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g1214 627 Pfam Xyloglucan fucosyltransferase 160 594 IPR004938 GO:0008107|GO:0016020|GO:0042546
Lal1g1214 627 Gene3D - 237 289 - -
Lal1g1214 627 MobiDBLite consensus disorder prediction 118 151 - -
Lal1g1214 627 PANTHER FUCOSYLTRANSFERASE 2-RELATED 13 625 IPR004938 GO:0008107|GO:0016020|GO:0042546
Lal1g1214 627 MobiDBLite consensus disorder prediction 114 151 - -
Lal1g1214 627 PANTHER GALACTOSIDE 2-ALPHA-L-FUCOSYLTRANSFERASE-LIKE PROTEIN 13 625 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g1214 Lal-Chr1 13385449 13388148 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g1214 143 622 Xyloglucan Fucosyltransferase1 AT2G03220 50.103 3.76e-165 482
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g1214 K13681 - gmx:100818288 725.317
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal20g1257 20 17079518 17082327 Lal1g1214 1 13385449 13388148 LSH
Lal1g1214 1 13385449 13388148 Lal18g0034 18 226284 229027 LSH
Lal25g0019 25 150581 156709 Lal1g1214 1 13385449 13388148 PCT
Lal1g1214 1 13385449 13388148 Lal25g0019 25 150581 156709 PCT