Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0715 ATGGTTGACCAGGTTCAGCGCCCTACAATCATGGAGAAGGTTTCCAGCCAGCTCCATCTCCGTTCTGGTGTTTCTTCTGATATTCAGAGTTACGATGCTGCTTTCCGCAGGCCTGCTGTGTATCAGAGGCGTTCATTTGGGAATTACTCAAATGCTGCATTACAGTATCCAGTGATGCCATCATGCAGAGCTACAACTGATTTATCTTCTGTTGCAACAGCCTCCCCCGTCTTTGCTGCGGCTCCTGCAGAGAAAGGCCACTTTCTCATCGACTTTCTCATGGGTGGAGTTTCAGCTGCTGTGTCTAAAACTGCTGCTGCTCCCATTGAACGTGTTAAACTTTTGATCCAGAACCAGGATGAGATGATCAAGTCTGGTAGACTTTCTGAGCCATACAAGGGTATCGGTGATTGTTTTAAGCGAACAATGGCAGATGAGGGTGTGGTTGCCCTATGGAGGGGTAACACTGCTAACGTCATTCGTTATTTCCCTACTCAGGCTTTGAACTTTGCATTCAAGGACTACTTCAAGAGGCTTTTCAACTTCAAGAAGGATAGGGATGGTTACTGGAAATGGTTTGCTGGCAACTTGGCCTCAGGAGGTGCTGCTGGTGCCTCATCCCTTTTTTTTGTGTACTCCCTCGACTATGCTCGTACTCGTCTGGCTAATGATTCAAAGGCTGCAAAGAAGGGTGGAGAGAGGCAGTTCAATGGTCTTGTGGATGTCTACAAGAAGACTTTGGCTTCTGATGGTGTCGCTGGTCTTTACCGTGGTTTCAACATTTCCTGTGTGGGAATCATTGTGTATCGTGGTCTCTACTTTGGAATGTATGATTCCCTGAAGCCAGTTCTTTTGACTGGTTCCTTGCAGGATAGTTTTTTCGCTAGTTTCGGTCTTGGATGGCTCATCACCAATGGTGCTGGTCTTGCATCATACCCAATTGACACTGTTAGAAGAAGAATGATGATGACCTCTGGTGAAGCCGTGAAGTACAAGAGCTCTTTGGATGCATTTTCCCAAATCCTCAAGAACGAGGGCGCCAAGTCCTTGTTTAAGGGAGCTGGTGCTAACATCCTCCGTGCCGTTGCTGGTGCTGGTGTGCTTGCCGGTTATGACAAGTTGCAGGTGATTGTGTTCGGAAAGAAGTACGGTTCTGGCGGTGCATAA 1167 0.4747 MVDQVQRPTIMEKVSSQLHLRSGVSSDIQSYDAAFRRPAVYQRRSFGNYSNAALQYPVMPSCRATTDLSSVATASPVFAAAPAEKGHFLIDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSEPYKGIGDCFKRTMADEGVVALWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNLASGGAAGASSLFFVYSLDYARTRLANDSKAAKKGGERQFNGLVDVYKKTLASDGVAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVLLTGSLQDSFFASFGLGWLITNGAGLASYPIDTVRRRMMMTSGEAVKYKSSLDAFSQILKNEGAKSLFKGAGANILRAVAGAGVLAGYDKLQVIVFGKKYGSGGA 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0715 388 SUPERFAMILY Mitochondrial carrier 87 373 IPR023395 -
Lal1g0715 388 PRINTS Mitochondrial carrier protein signature 91 104 IPR002067 GO:0055085
Lal1g0715 388 PRINTS Mitochondrial carrier protein signature 104 118 IPR002067 GO:0055085
Lal1g0715 388 PRINTS Mitochondrial carrier protein signature 154 174 IPR002067 GO:0055085
Lal1g0715 388 PRINTS Mitochondrial carrier protein signature 206 224 IPR002067 GO:0055085
Lal1g0715 388 PRINTS Mitochondrial carrier protein signature 256 274 IPR002067 GO:0055085
Lal1g0715 388 PRINTS Mitochondrial carrier protein signature 300 322 IPR002067 GO:0055085
Lal1g0715 388 ProSiteProfiles Solute carrier (Solcar) repeat profile. 191 283 IPR018108 -
Lal1g0715 388 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 2 388 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Lal1g0715 388 ProSiteProfiles Solute carrier (Solcar) repeat profile. 86 179 IPR018108 -
Lal1g0715 388 ProSiteProfiles Solute carrier (Solcar) repeat profile. 291 377 IPR018108 -
Lal1g0715 388 Pfam Mitochondrial carrier protein 190 286 IPR018108 -
Lal1g0715 388 Pfam Mitochondrial carrier protein 87 183 IPR018108 -
Lal1g0715 388 Pfam Mitochondrial carrier protein 292 377 IPR018108 -
Lal1g0715 388 PANTHER ADP,ATP CARRIER PROTEIN 1, MITOCHONDRIAL-LIKE 2 388 - -
Lal1g0715 388 Gene3D Mitochondrial carrier domain 89 384 IPR023395 -
Lal1g0715 388 PRINTS Adenine nucleotide translocator signature 88 100 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Lal1g0715 388 PRINTS Adenine nucleotide translocator signature 132 153 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Lal1g0715 388 PRINTS Adenine nucleotide translocator signature 165 177 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Lal1g0715 388 PRINTS Adenine nucleotide translocator signature 191 204 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Lal1g0715 388 PRINTS Adenine nucleotide translocator signature 296 312 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0715 Lal-Chr1 4795703 4798991 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0715 1 4795703 4798991 Lal2g0874 2 5675462 5678809 ECH
Lal1g0715 1 4795703 4798991 Lal1g0715 1 4795703 4798991 ECH