Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0712 ATGGCCTTGGACTCTATAACCTCGAAATCTAGCTTTTGTGGCGTGGTTCTCCCAATGATGGCAAAGCCAATCACAGCCTTGGGTGGCCAAGTCTGCCAGATATGTAGCGACAATGTTGGAACGACTGTGGATGGTGGTGAACCATTCGTTGCATGCGATGTTTGTGCTTTCCCTGTCTGCAGGCCTTGCTATGAGTATGAAAGGAAGGATGGGAAGCAGTCTTGCCCCCAGTGCAAAACACGGTACAAGAGGCATAAAGGAAGTCCTGCAATTCTTGGAGACAGGGAAGATTGCAGCGCTGATAGTGGTGTTAGTGACTTCAATTACAATTTAGAAAAGCAGAAAATCTCAGATCGCATGTTGAGCTGGCACATGACTCAGCATCGAGCAGAGGAGGTTGGTGCTCCAAATTATGGCAAGGAAGTTTCTCACAACCACGTTCCTCATCTCACCAGTGGACAAGAGCTGTCTGGAGAGTTAAGTGCAGCCTCACCCGAGCGACTATCAATGGCATCTCCTGAAGTTGGTGACGGGAAGCGTGACAATCTTCCATATTCGTCTGATGTTAATCAATCTCGTATCACTCTGCCCCTCCTCACTCCCATTTTTGTCTATTCTGTTCGCTATGTTGGACTGATACTTCAAAATGGTTTCAGTACAGTTATCCGATATGTATCATCAAATACTAAGGTTGTGGATTCAGGATTGGGAAATGTAGCATGGAAAGAAAGGGTTGATGTCTGGAAGGTGAAGCAAGAGAAGAATGTTGTTCCAATGAGCACAGTCCAAGCTGCATCCGAAAGAGGAGGTGGAGATATCGATGCTTGTACTGATGTGCTTGTCGATGATTCCTTGTTGAATGATGAAGCCCGACAACCTCTTTCTAGGAAGGTTTCTATTCCATCATCTAGGATCAATCCATATAGACTGGTCATTGTTCTGAGGCTGATTGTTCTCTGCATTTTCTTGCATTATCGAATAACAAATCCAGTGCCCAATGCATATTCAGTGTGGCTGGTATCAGTTATATGTGAGATTTGGTTCGCTATATCTTGGATATTGGATCAATTCCCCAAGTGGCTTCCAGTAAACCGTGAAACATATCTTGACCGGCTTACACTGAGATACGACTGGGAAGGAGAACCATCACAGCTAGCAGCTATTGACATTTTTGTCAGTACTGTTGACCCATTAAAGGAGCCTCCACTTGTGACTGCCAATACTGTGCTATCTATTCTTGCTGTCGACTACCCAGTGCATAAGGTCTCCTGCTACGTCTCTGACGATGGTGCTGCTATGTTAACATTTGAAGCACTTGCCGAGACATCAGAATTTGCAAGGAAATGGGTTCCTTTTTGCAAGAAGTATAGTATCGAACCGCGTGCACCTGAGTGGTACTTTGCACAGAAGATTGACTACTTGAAGGATAAGGTTCAACCATCATTTGTCAAGGATCGTCGAGCAATGAAGAGAGAATATGAAGAATTTAAAATTCGTATTAATGGACTCGTTGCAAAAGCAACAAAAGTTCCTGAAGAAGGATGGGTGATGCAAGACGGTACACCATGGCCTGGGAATAACACCAGAGACCATCCAGGAATGATCCAGGTTTTCTTGGGTCAAAGTGGAGGAGTTGACTCTGATGGTAACGAGCTTCCTCGTTTAGTTTATGTTTCTCGTGAAAAGCGTCCAGGGTTCCAACATCACAAGAAAGCTGGTGCCATGAATGCACTTGTCCGTGTATCTGCCGTCCTTACTAATGGACCCTTTTTATTGAATCTTGATTGTGATCACTACATAAACAACAGCAAGGCTTTGAGGGAAGCTATGTGTTTTATGATGGACCCCAACCTCGGGAAACATGTTTGTTTTGTCCAGTTTCCACAGAGGTTTGACGCCATTGATAAGAATGATCGCTATGCCAATCGTAATACTGTTTTCTTTGATATTAACTTGAGAGGTTTGGATGGCATTCAAGGTCCAGTTTATGTGGGTACTGGTTGTGTCTTCAATAGGACAGCTTTATATGGTTATGAACCTCCTCTTAAACCGAAGCATAAAAAGCCCGGGTTGCTATCTTCGTTCTGTGGTGGAAATCGGAAGAAAAGTTCAAAATCTAGTAAGAAAGGATCAGATAAGAAAAAATATAGCAAGCATGTTGACCAAACTGTGCCAATCTCTTCCTTAGAGGATATAGAAGAAGGAATAGAAGGTACTGGATTTGATGACGAGAAATCACTACTTATGTCACAAATGAGCCTTGAGAATAGGTTTGGTCAGTCTGCTGTTTTTGTTGCATCTACCCTTATGGAGAATGGTGGTGTTCCCCAGTCTGCGACTCCCGAAACTCTTCTTAAGGAGGCTATTCATGTTATTAGCTGTGGTTATGAGGATAGAACAGAGTGGGGAACTGAGGCCGTGTTTGCGAATTGTGTTTTGGAGGAGAATTTACAAGAGTATTTCATGACTTTGAACTTTTCTCGTTCCTTTCCCTACTCCAAAACTCAACTCACAAACACACTCTTAAGAGTTTCTAACTTGTTTCATTTCCAACTAGAGATAGGATGGATATATGGTTCTGTCACAGAAGATATTCTGACTGGATTTAAGATGCATGCCCGTGGTTGGCGATCTATATACTGCATGCCTAAGCGCCCGGCATTTAAAGGTTCTGCTCCTATCAATCTTTCCGATCGTCTGAACCAAGTGCTTCGGTGGGCTTTAGGTTCGGTGGAAATTCTCTTTAGTCGACATTGTCCGATCTGGTATGGTTATGGTGGAAGGCTAAAGTGGCTCGAAAGGTTAGCATATGTGAACACCACAATCTATCCAGTCACTGCCATTCCTCTTCTCATGTATTGTACCTTGCCTGCTGTTTGTCTTCTGACTAACAAGTTTATTATTCCCCAGATTAGTAACCTTGCAAGTATATGGTTCATCTCTCTATTTCTTTCCATTTTCGCAACGGGAATCCTCGAAATGAGGTGGAGTGGTGTTGGAATTGATGAGTGGTGGAGGAATGAACAATTCTGGGTTATTGGTGGTGTATCAGCACATCTTTTTGCTGTATTTCAAGGCTTACTCAAAGTTCTTGCTGGAATTGACACCAACTTCACTGTTACATCTAAGGCTTCAGATGAAGATGGAGACTTTGCAGAACTCTACATGATCAAATGGACAACACTTCTTATTCCACCCACAACACTTCTCATCATAAACTTGGTAGGGGTTATTGGAGGCATATCCTATGCCATTAACAGTGGTTACCAATCATGGGGTCCTCTCTTTGGTAAACTTTTCTTTGCATTTTGGGTTATCATCCATCTTTACCCATTCCTTAAAGGTCTCATGGGACGACAAAATCGAACGCCGACCATCGTCGTGGTCTGGTCGATTCTTCTTGCATCCATTTTTTCGCTCTTATGGGTTCGAGTCGATCCGTTTATTACAAGAGTAACTGGTCCTAATGTTGAGGAGTGTGGAATTAACTGCTAG 3495 0.432 MALDSITSKSSFCGVVLPMMAKPITALGGQVCQICSDNVGTTVDGGEPFVACDVCAFPVCRPCYEYERKDGKQSCPQCKTRYKRHKGSPAILGDREDCSADSGVSDFNYNLEKQKISDRMLSWHMTQHRAEEVGAPNYGKEVSHNHVPHLTSGQELSGELSAASPERLSMASPEVGDGKRDNLPYSSDVNQSRITLPLLTPIFVYSVRYVGLILQNGFSTVIRYVSSNTKVVDSGLGNVAWKERVDVWKVKQEKNVVPMSTVQAASERGGGDIDACTDVLVDDSLLNDEARQPLSRKVSIPSSRINPYRLVIVLRLIVLCIFLHYRITNPVPNAYSVWLVSVICEIWFAISWILDQFPKWLPVNRETYLDRLTLRYDWEGEPSQLAAIDIFVSTVDPLKEPPLVTANTVLSILAVDYPVHKVSCYVSDDGAAMLTFEALAETSEFARKWVPFCKKYSIEPRAPEWYFAQKIDYLKDKVQPSFVKDRRAMKREYEEFKIRINGLVAKATKVPEEGWVMQDGTPWPGNNTRDHPGMIQVFLGQSGGVDSDGNELPRLVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNGPFLLNLDCDHYINNSKALREAMCFMMDPNLGKHVCFVQFPQRFDAIDKNDRYANRNTVFFDINLRGLDGIQGPVYVGTGCVFNRTALYGYEPPLKPKHKKPGLLSSFCGGNRKKSSKSSKKGSDKKKYSKHVDQTVPISSLEDIEEGIEGTGFDDEKSLLMSQMSLENRFGQSAVFVASTLMENGGVPQSATPETLLKEAIHVISCGYEDRTEWGTEAVFANCVLEENLQEYFMTLNFSRSFPYSKTQLTNTLLRVSNLFHFQLEIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYGGRLKWLERLAYVNTTIYPVTAIPLLMYCTLPAVCLLTNKFIIPQISNLASIWFISLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSAHLFAVFQGLLKVLAGIDTNFTVTSKASDEDGDFAELYMIKWTTLLIPPTTLLIINLVGVIGGISYAINSGYQSWGPLFGKLFFAFWVIIHLYPFLKGLMGRQNRTPTIVVVWSILLASIFSLLWVRVDPFITRVTGPNVEECGINC 1164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0712 1164 Pfam Zinc-binding RING-finger 22 97 IPR027934 -
Lal1g0712 1164 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 526 679 IPR029044 -
Lal1g0712 1164 Pfam Cellulose synthase 388 820 IPR005150 GO:0016020|GO:0016760|GO:0030244
Lal1g0712 1164 Pfam Cellulose synthase 852 1157 IPR005150 GO:0016020|GO:0016760|GO:0030244
Lal1g0712 1164 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 18 106 IPR013083 -
Lal1g0712 1164 SUPERFAMILY Nucleotide-diphospho-sugar transferases 402 676 IPR029044 -
Lal1g0712 1164 MobiDBLite consensus disorder prediction 153 181 - -
Lal1g0712 1164 MobiDBLite consensus disorder prediction 689 719 - -
Lal1g0712 1164 CDD mRING-HC-C4C4_CesA_plant 30 81 - -
Lal1g0712 1164 PANTHER CELLULOSE SYNTHASE 20 818 - -
Lal1g0712 1164 PANTHER CELLULOSE SYNTHASE 852 1164 - -
Lal1g0712 1164 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 852 1164 - -
Lal1g0712 1164 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 20 818 - -
Lal1g0712 1164 SUPERFAMILY RING/U-box 21 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0712 Lal-Chr1 4765613 4772846 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0712 1 4765613 4772846 Lal1g0712 1 4765613 4772846 ECH
Lal1g0712 1 4765613 4772846 Lal9g0682 9 4708562 4716183 LSH
Lal1g0712 1 4765613 4772846 Lal20g0652 20 6019811 6027755 PCT