Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0711 ATGTACATCAAGGAAATATGTTTGGAGGGTTTCAAATCCTACGCCACCAGAACCGTGGTTCCAGGCTTCGATCCATTCTTCAACGCAATCACTGGCTTGAACGGTTCCGGTAAATCCAACATTCTCGATTCAATTTGCTTTGTTTTGGGAATTACCAATTTGCAGCAGGTTAGGGCTTCCAATCTTCAGGAACTTGTGTATAAACAAGGTCAAGCAGGAATAACCAAAGCTACGGTTTCGATTTTGTTTGATAACTCAGATAGGAATCGTAGCCCTCTTGGTTATGAAGATCATTCTGAGATTACAATCGTGGTTGGAGGAAGGAACAAATATTTGATCAATGGCAAACTTGCACAGCCAAGTCAAGTTCAAAACCTTTTTCATTCTGTGCAGCTAAATGTGAATAACCCGCATTTTCTTATAATGCAAGGGCGAATCACCAAGGTTTTAAATATGAAACCACCAGAGATATTGTCTATGCTTGAGGAAGCTGCAGGGACAAGAATGTATGAGACAAAGAAAGAGGCTGCTCTAAAAACACTTGAGAAGAAGCAGAGCAAGGTTGAGGAGATAAATAAGCTTCTTGACCAGGAGATACTGCCTGCTCTGGAGAAGCTAAGGAAAGAAAGGACACAGTACATGCAATGGGCTAATGGCAATGCTGAGTTAGATAGGCTAAGAAGATTTTGTGTAGCTTATGAGTATGTTCAAGCAGAGAGGATTAAAGACAATGCGATGTCTGAGGTGGAACAAGTAAAAGCTAAGATAGCTGAGATTGATGATACTGCTAAGACAACTCAGGTGGAAGTAAAGGAAATGGAGAACAAAGTAGCTCAGTTGACTGCTGCAAAGGAAGCAAGCATGGGTGAAGAACTGAAACCTTTGTCAGAGAAGGTTGATAAACTTTCCCAGAACCTTGTGAAGGAAACATCTATACTAAATAATACAGAAGACACACTGAAGAGTGAAGAAGCCAACAAAAAGAATATTGCCAAAAATATTGAGGAACTGAAACAATCTGTAGAAGAGAAGGCCTCTGTTGTTAAAATGGCTGAAGAGGGAGCCACTGATCTGAAAAAGAGAGTTGACGAGCTCTCAAAGAGTCTGGAAGAGCATGAAAAGGAATATCAGGGTGTTTTAGCAGGGAAGAGTAGTGGTGATGAGGAGAAATGTTTAGAGGACCAACTAGGCGATGCAAAGGTAGCTGTTGGGAGTGCTGAAACAGAATTGAAACAGCTGAAAACCAAAATTAACCATTGTGAAAAGGAACTCGAAGTGAAAACAAAGCTATTAAGGTCAAAACATGAAGAAGCTATTTCTGTAGAAAATGAGTTAAATGCCAGACAAAAAGATGTGGAAAATGTCAAAAAGGAATTAGAGTTTCTTCCTTATAAAGAGGGTGAGATGGAAGCTCTGCAAAAGGACCGTTCATCTGAGATGGATTGTGTGCAAAAGTGGAAGGATGAAATACGTAATGTTTCAGCATACTTAGCAAATGTTGAATTTACATACCATGATCCTTTCAAGAACTTTGATAGGTCAAAGGTGAAAGGTGTTGTTGCAAGACTTATCAAAGTAAAGGATCCATCCACAATGACTGCCCTAGAGGTTACAGCTGGTGGAAAGTTGTTTAATGTTGTTGTGGACACAGAAAATACTGGAAAACAACTACTACAAAATGGTAATCTTAGAAGAAGAGTGACAATAATACCTTTGAACAAAATACAATCCTATGCTGTTCCATCTAGAGCTCAACAAGCTGCTGTTAGATTGGTAGGCAAGGCGAATGCTGAAGTAGCACTTTCTTTGGTTGGTTATGAAGAAGAATTGAGGAATGCAATGGAATATGTATTTGGTTCAACTTTTGTTTGCAAAACCATTGATGCTGCTAAAGAGGTGGCATTCAACAGGGAGATTCACACCACAAGTGTCACTCTTGAAGGAGATATATTTCAGCCAAGTGGTCTTCTGACTGGTGGAAGCCGGAAGGGTAGTGGTGATCTTTTGAAGCAACTTCATGATTTGGCTGAGGCTGAGTCAAAACTTCTGGTGCATCAAAGAAGGTTATCAGAGATTGAGGCAAAGGAGAAATTTAAAGATCTCAAAGCACAGTTAGAACTCAAGTCATATGATCTTTCATTGTTTCAGAGCAGAGCTGAGCAAAATGAGCATCACAAGCTTGGGGAATTAGTGAAGAAGATTGAGCAAGAGCTTGAAGAAGCAAAATCTGTAATAGAGGAAAAGCAAGTTCTGTATGAAGAATGCATCAAGACTGTTAAATCACTTGAGAAATCAATCAAAGACCATGATAATAATCGAGAGACTAGACTAAAAGACTTGGACAAAAAGATAAAGTCCATCAAGTCACAAATGCAGTCATCTTCAAAAGATCTGAAGGGACATGATAATGAAAAGGAGAGACTTGTAATGGAAATGGAAGCTGTTGTCAAGGAGCAAGGTTCCTTGGAGAATCAATTAGCTTCATTGGGAACACAGATTAGTGATCTTGCCTCAGAAGTAGAGGAACAAAGAGCCAAGGTTGTCTCTGCGAGGAATGAACTCGATCAAGTTCAGTCACAGATGAATTCAGTTCGCCAGAAAATGAAGGACTGTGACAAGGAAATCAGTGGTATTATTAAGGAGCAGCAAAAGCTTGAACACAAACTTACTGAGGGTAATCTCGAATGGAAGAGGATGGAAAATGAGGTAAAACGGATGGAGATGGAACAGAAAGACTGTTCTACAAGAGTGGATAAATTGGTAGAGAAGCATGCATGGATTGCTACCGAAAAACAGTTTTTTGGTAAAAGTGGGACTGATTATGATTTCTCTTCCCGAGATCCTGGTAAAGCAAGAGAAGAACTTGAGAGGCTTCAGGCTGAACAATCTGGGCTTGAGAAAAGGGTCAATAAGAAAGTAATGGCAATGTTTGAAAAGGCCGAAGATGAGTACAATGACTTGATGTCCAAGAAAAACATAATTGAGAATGACAAGTCTAAAATCAAGAAGGTGATCGAAGAGTTAGATGAGAAGAAGAAGGAGACACTAAACGTTACCTGGACCAAAGTGAACAGTGACTTTGGATCCATCTTTTCTACACTATTACCAGGCACAATGGCTAAGTTAGAACCTCCAGAAGGATGCAGTTTTCTTGATGGTCTTGAGGTTCGTGTTGCATTTGGAAGTGTGTGGAAACAGTCATTGTCTGAACTGAGTGGAGGTCAGCGATCACTGCTCGCACTTTCCCTGATTCTGGCACTTCTTCTATTCAAACCCGCTCCACTTTACATCCTTGATGAGGTTGATGCGGCTCTTGATTTGAGTCACACACAAAACATAGGGAGAATGATAAAGGCTCACTTTCCACACTCCCAGTTTATTGTGGTTTCACTAAAGGAGGGCATGTTCAATAATGCAAATGTTCTTTTCCGGACAAAATTTGTAGATGGTGTTTCTACTGTTCAGCGAACTGTTGCTAAGCAAAACAAGTGA 3492 0.4009 MYIKEICLEGFKSYATRTVVPGFDPFFNAITGLNGSGKSNILDSICFVLGITNLQQVRASNLQELVYKQGQAGITKATVSILFDNSDRNRSPLGYEDHSEITIVVGGRNKYLINGKLAQPSQVQNLFHSVQLNVNNPHFLIMQGRITKVLNMKPPEILSMLEEAAGTRMYETKKEAALKTLEKKQSKVEEINKLLDQEILPALEKLRKERTQYMQWANGNAELDRLRRFCVAYEYVQAERIKDNAMSEVEQVKAKIAEIDDTAKTTQVEVKEMENKVAQLTAAKEASMGEELKPLSEKVDKLSQNLVKETSILNNTEDTLKSEEANKKNIAKNIEELKQSVEEKASVVKMAEEGATDLKKRVDELSKSLEEHEKEYQGVLAGKSSGDEEKCLEDQLGDAKVAVGSAETELKQLKTKINHCEKELEVKTKLLRSKHEEAISVENELNARQKDVENVKKELEFLPYKEGEMEALQKDRSSEMDCVQKWKDEIRNVSAYLANVEFTYHDPFKNFDRSKVKGVVARLIKVKDPSTMTALEVTAGGKLFNVVVDTENTGKQLLQNGNLRRRVTIIPLNKIQSYAVPSRAQQAAVRLVGKANAEVALSLVGYEEELRNAMEYVFGSTFVCKTIDAAKEVAFNREIHTTSVTLEGDIFQPSGLLTGGSRKGSGDLLKQLHDLAEAESKLLVHQRRLSEIEAKEKFKDLKAQLELKSYDLSLFQSRAEQNEHHKLGELVKKIEQELEEAKSVIEEKQVLYEECIKTVKSLEKSIKDHDNNRETRLKDLDKKIKSIKSQMQSSSKDLKGHDNEKERLVMEMEAVVKEQGSLENQLASLGTQISDLASEVEEQRAKVVSARNELDQVQSQMNSVRQKMKDCDKEISGIIKEQQKLEHKLTEGNLEWKRMENEVKRMEMEQKDCSTRVDKLVEKHAWIATEKQFFGKSGTDYDFSSRDPGKAREELERLQAEQSGLEKRVNKKVMAMFEKAEDEYNDLMSKKNIIENDKSKIKKVIEELDEKKKETLNVTWTKVNSDFGSIFSTLLPGTMAKLEPPEGCSFLDGLEVRVAFGSVWKQSLSELSGGQRSLLALSLILALLLFKPAPLYILDEVDAALDLSHTQNIGRMIKAHFPHSQFIVVSLKEGMFNNANVLFRTKFVDGVSTVQRTVAKQNK 1163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0711 1163 Coils Coil 777 797 - -
Lal1g0711 1163 Coils Coil 826 874 - -
Lal1g0711 1163 Coils Coil 313 340 - -
Lal1g0711 1163 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 2-2 1 1161 - -
Lal1g0711 1163 Gene3D - 982 1163 IPR027417 -
Lal1g0711 1163 Pfam RecF/RecN/SMC N terminal domain 2 1149 IPR003395 -
Lal1g0711 1163 Coils Coil 403 430 - -
Lal1g0711 1163 Gene3D - 1 198 IPR027417 -
Lal1g0711 1163 Coils Coil 235 290 - -
Lal1g0711 1163 PIRSF SMC 1 1143 IPR024704 GO:0005524|GO:0016887
Lal1g0711 1163 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 2 1 1161 - -
Lal1g0711 1163 CDD ABC_SMC2_euk 1 152 IPR027120 GO:0005524|GO:0016887
Lal1g0711 1163 SMART SMC_hinge_2 514 634 IPR010935 GO:0005515|GO:0005524|GO:0005694|GO:0051276
Lal1g0711 1163 Coils Coil 438 458 - -
Lal1g0711 1163 Coils Coil 970 1014 - -
Lal1g0711 1163 Gene3D - 427 586 - -
Lal1g0711 1163 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 1145 IPR027417 -
Lal1g0711 1163 Coils Coil 348 375 - -
Lal1g0711 1163 Coils Coil 724 772 - -
Lal1g0711 1163 Coils Coil 174 198 - -
Lal1g0711 1163 Gene3D - 587 662 - -
Lal1g0711 1163 Coils Coil 675 695 - -
Lal1g0711 1163 SUPERFAMILY Smc hinge domain 483 681 IPR036277 GO:0005515|GO:0005524|GO:0005694|GO:0051276
Lal1g0711 1163 Gene3D - 772 932 - -
Lal1g0711 1163 SUPERFAMILY Tropomyosin 296 476 - -
Lal1g0711 1163 Pfam SMC proteins Flexible Hinge Domain 514 634 IPR010935 GO:0005515|GO:0005524|GO:0005694|GO:0051276
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0711 Lal-Chr1 4750992 4760374 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0711 1 4750992 4760374 Lal2g0883 2 5753038 5762362 LSH