Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0707 ATGGGGAAGATAGAAAAAAAACACAAGAATTTTTCAGTGCACTTTCTATCCTCCTTGTCATCTTTCAACATGGTTAACCTCCTGGTCATTTTTCTCTTGACCTTTTCATTGCCTGCATATTCATCTTTCACTCCTAAAGATAGCATTCTTATTGATTGTGGTGCCGAAAATGCGCCTATTCTTCCTGATGGAAGACAATTCAAATCAGACCCTCAAGCTAATTCTTTCTTACAAGCCAATGATGACTATAAGGTTTCAGCTGAAGATGATTCTAATCTTCCTTCACCTATATATAAAACTGCAAGGATATTCATTCAGGAAGCTAAGTATTCCTTCCATTTGGCCGAGCCGGGGTATCATTGGATTCGCCTTCATTTTTATCCGGTAAAAAACAATGTATTTGATCTTCAGAAGGCCACTTTTTCTGTTAACACAAATACCTATGTCCTTCTTCATAGTTTCAATGTTAATAACAATGACAAGCCAATCCTCAAGGAGTACCTCATCAATGCAAATGAATCACAGTTCAACTTGGTCTTCATTCCGTTGAAGAACTCTGCTGCATTCATCAATGCCGTTGAGGTTGTTTCAGCTCCTGGTAACCTGATCTTTGACACCGGGGCTGCCCTTTTTCCGGTCGGCGACTTCTCTGGCCTAACAAGTTATGGTATACAACCTGTTTATAGGCTCAACAATGGAGGACCCTTGATCACCTCATCAAATGACACCCTTGGAAGAATTTGGGAATCTGATGAGCCTTTCCTCACAAACAAGAACTTGGCGAAAAGTGTCTCGATCGCCACCAACGCAATTAAGTTCCCTATTGATACACCAACAATTTCTCCTCTTGTTGCACCACAATCTGTGTATGCTTCTGCCACTGAGATGGGTGATGCTGGTGTTAATCAGCCAAATTTCAATGTCTCATGGAAATTTGATGTGGACACTTCTTTTAGTTACCTTGTTAGATTGCATTTCTGTGATATTGTTAGCAAAGGGCTTAATGAACTCTACTTTAACGTCTATGTGAATGGGAAAATGGCAATTTCTAACTTGGACTTATCGGCTATTACGGGTGCCTTGTCAACACCGTATTACAAAGACATTGTGGTTAATGCAACATTGATGTCTGAGGGACTATCAATTCAAGTTGGGCCAGCAAAGGCTGAGGGTGGAAATGCCAATGCCATTGTGAATGGTATAGAGGTGATGAAGTTGAGCAATTCAGTGGATAGTTTGGATGGAGAATTTGGTGTTGATGGAAGAAAGATTGGTGGTTCTAACCGAGGTACAGTTGCGGCTGTTGGATTTGCCATGATGTTTGGAGCATTTGTTGGTCTTGGTGCCATGGTGATCAAGTGGCACAAGAGACCACAGGATTGGCAAAAGAGGAATAGCTTTTCTTCATGGTTACTTCCTCTACATGCCGGTGATACAAGCTTTAGTAGCAGCAAGGGTAACATGTACTCATCAACAATGGGATTAGGAAGGTACTTTTCCTTTGCAGAGCTGCAGGAAGCAACCAAGAACTTCGATTCCAAGGCAATTATCGGTGTTGGTGGATTCGGCAATGTGTATTTGGGTGTTATTGATGAGGGGACTAAAGTGGCAGTAAAGAGAGGAAACCCACAATCAGAACAAGGTATAACAGAATTCCAAACAGAAATTCAAATGTTGTCGAAGCTTAGACATAGACATTTGGTGTCCTTGATTGGATATTGTGATGAGAATGAAGAGATGATCCTGGTTTATGAGTACATGCCTAATGGACATTTCAGAGACCATCTTTATGGGAAGAATTTGCCGGTTCTTTCTTGGAAGCAAAGGTTAGAGGTCTGTATTGGAGCAGCTCGCGGCCTTCACTACCTTCACACCGGAACAGCACAAGGTATCATTCATCGCGATGTCAAGACAACCAATATCTTGATTGATGAAAACTTCACAGCCAAGGTATCCGATTTTGGACTTTCAAAGGATGCACCTATGGGTCAGGGTCATGTTAGCACAGCAGTGAAGGGTAGCTTTGGTTATCTTGACCCTGAGTACTTCAGGAGGCAGCAATTGACAGAAAAATCGGATGTCTACTCATTCGGTGTGGTCCTTCTCGAGGCACTATGTGCAAGGCCGGCTATTAACCCTCAGTTGCCACGCGAACAAGTAAACTTGGCCGATTGGGCAATGCAATGGAAGAGGAAAGGCTTGCTTGACAAAATCATTGACCCCCTTCTTGTTGGTAACATCAATCCCGAATCGATGAAGAAGTTTGCCGAGGCTGCTGAGAAGTGTTTGGCTGATTATGGAGTTGATAGGCCTTCAATGGGAGATGTGTTATGGAACTTGGAGTATGCATTGCAGCTTCAAGAAGCTTTCACACAAGGAAAAGCTGAGGATGAGAATGAGGCCAATTCCTCACCTGATTCCACACCTTCCATCAACTCAGAGGACCATGACACACCACCACCACCACCAGCTGCTACTACTACTACTCCACAACCAGAAGTTAATAGCAACCATTCAGCACTAGTACCACAAACTATTGATGACCATTCTGGAACTGCAATGTTTGCGCAGTTCAGTGATCTTAATGGCAGGTGA 2595 0.4277 MGKIEKKHKNFSVHFLSSLSSFNMVNLLVIFLLTFSLPAYSSFTPKDSILIDCGAENAPILPDGRQFKSDPQANSFLQANDDYKVSAEDDSNLPSPIYKTARIFIQEAKYSFHLAEPGYHWIRLHFYPVKNNVFDLQKATFSVNTNTYVLLHSFNVNNNDKPILKEYLINANESQFNLVFIPLKNSAAFINAVEVVSAPGNLIFDTGAALFPVGDFSGLTSYGIQPVYRLNNGGPLITSSNDTLGRIWESDEPFLTNKNLAKSVSIATNAIKFPIDTPTISPLVAPQSVYASATEMGDAGVNQPNFNVSWKFDVDTSFSYLVRLHFCDIVSKGLNELYFNVYVNGKMAISNLDLSAITGALSTPYYKDIVVNATLMSEGLSIQVGPAKAEGGNANAIVNGIEVMKLSNSVDSLDGEFGVDGRKIGGSNRGTVAAVGFAMMFGAFVGLGAMVIKWHKRPQDWQKRNSFSSWLLPLHAGDTSFSSSKGNMYSSTMGLGRYFSFAELQEATKNFDSKAIIGVGGFGNVYLGVIDEGTKVAVKRGNPQSEQGITEFQTEIQMLSKLRHRHLVSLIGYCDENEEMILVYEYMPNGHFRDHLYGKNLPVLSWKQRLEVCIGAARGLHYLHTGTAQGIIHRDVKTTNILIDENFTAKVSDFGLSKDAPMGQGHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLLEALCARPAINPQLPREQVNLADWAMQWKRKGLLDKIIDPLLVGNINPESMKKFAEAAEKCLADYGVDRPSMGDVLWNLEYALQLQEAFTQGKAEDENEANSSPDSTPSINSEDHDTPPPPPAATTTTPQPEVNSNHSALVPQTIDDHSGTAMFAQFSDLNGR 864
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0707 864 PANTHER BNAC03G60370D PROTEIN 33 829 - -
Lal1g0707 864 MobiDBLite consensus disorder prediction 791 848 - -
Lal1g0707 864 Gene3D - 48 199 - -
Lal1g0707 864 Gene3D - 224 408 - -
Lal1g0707 864 Gene3D Phosphorylase Kinase; domain 1 479 586 - -
Lal1g0707 864 Pfam Malectin-like domain 51 405 IPR024788 -
Lal1g0707 864 Pfam Protein tyrosine and serine/threonine kinase 515 707 IPR001245 GO:0004672|GO:0006468
Lal1g0707 864 SMART serkin_6 511 783 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal1g0707 864 MobiDBLite consensus disorder prediction 829 848 - -
Lal1g0707 864 ProSitePatterns Protein kinases ATP-binding region signature. 517 539 IPR017441 GO:0005524
Lal1g0707 864 ProSitePatterns Serine/Threonine protein kinases active-site signature. 631 643 IPR008271 GO:0004672|GO:0006468
Lal1g0707 864 Gene3D Transferase(Phosphotransferase) domain 1 587 807 - -
Lal1g0707 864 SUPERFAMILY Protein kinase-like (PK-like) 494 778 IPR011009 -
Lal1g0707 864 ProSiteProfiles Protein kinase domain profile. 511 783 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal1g0707 864 CDD STKc_IRAK 517 781 - -
Lal1g0707 864 PANTHER OS07G0166700 PROTEIN 33 829 IPR045272 GO:0004714|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0707 Lal-Chr1 4721868 4724462 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Lal1g0707 Malectin_like 3e-38 CL0202
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0707 1 4721868 4724462 Lal2g0770 2 4941843 4945481 LSH
Lal1g0707 1 4721868 4724462 Lal9g0675 9 4647441 4649966 LSH