Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0706 ATGGGTGCTGCTTGCTGTGTTGCAGCCAAAGATAAAACTGTACAAAGTGGATCTACCCGTGCAATCGTACATCGGACCATTCGGAGTTCTCCGACATGGAGCTTCCGCTGGGATCATCGAGGTCGCGTAGCTGGTGAAGATGCTTCTATAACATGGTTTTCTGATGGTATTAGTAGGAATGATGGATCAGAGAATAAAAATGAAATACCATATGTATCAGAGGACGGAAGCCCATTGCAGAGTGATCAAAGGAGTAGATGCCAAAAATACCCAATTTCTGAAAGAAGTGCCGCGCTTGTAATAAATTCTACTTCGGATCAATCAATTTCTATGGATGTCTCTATGGATGCGAATGTGGAACCGGTGAAGGAGCTGGAAGAGTTATCAACAATATCATGTCCATCTCCCACAAAACCTTCATCCTCATTAACCCCATCATCCTCGCTGTCGGCATCTCCTCTGCCATCCCAAAGTCGCATTGCTCCCTCCACCTCAACCCCATCAAGGTTGCCCCACCATTCCCCAGGACATCAACTATCACGGCAAGTTTCTGACAGCCGAGTCCCAGGATTCAAGTCACCAAGCACCTTTTATGTGTCTGAACAAAAGCAAGTGTTTCCTTCATGGAGCAATGAATCGGGTATGCGCTCTTGTGACGGATCTTCATATGGTTGGTCTGTGCCTGGCTGTTCTGAGCTGATGGGAATTTCCCATAGAGAAAGATGGTCGTTTGATAGTGAATCATCTGGGTTTAATCATGACAGGTTACTTAGATCAAGTAGTCAGTTTTCAACATCTCCAGTTGATTTGCAAACATGTCCCATTTGCTCAAAACTATTAACTGAGAAATCTTCTTGGAGCTCCCAAAAGATGATTGCAAGCAATGACCTTGCTGTAGTTTCTGTTCTTATTTGTGGCCATGTCTATCACGCTGAATGTTTGGAGAGTATGACACCTGAAACCAAGAAGTATGATCCCGCTTGCCCAGTTTGCACTTTTGGTGAGAAACAAATTCTTAAGTTGTCTGAAAAAGCTCTGAAAGCTGAAATGAATCTAAGGGCTAGAAACAAGAAATCAAAGAACCGAATTGTGGACAGTGAATTTGATGATGATTTTGTGTTTGATCACTTTAAAGATGGGGGGCGACAAGGACAAGGTCTTAGGATGTACTCTAGTTCCAGTGGGAGAAGATCCTTTGGAAAACATTTTCTGAGGAGACACTTCTCATTTGGCTCAAAGAGTTCCAAATCCATAAGGGATTCTTTTGGGCGAAATCTAGCAAACAATAAGCGGCTTCTTGTTTGTTGGGAGGTTCCATTATCTACTCTGCAACCTCAGATAAACAACTAA 1350 0.4326 MGAACCVAAKDKTVQSGSTRAIVHRTIRSSPTWSFRWDHRGRVAGEDASITWFSDGISRNDGSENKNEIPYVSEDGSPLQSDQRSRCQKYPISERSAALVINSTSDQSISMDVSMDANVEPVKELEELSTISCPSPTKPSSSLTPSSSLSASPLPSQSRIAPSTSTPSRLPHHSPGHQLSRQVSDSRVPGFKSPSTFYVSEQKQVFPSWSNESGMRSCDGSSYGWSVPGCSELMGISHRERWSFDSESSGFNHDRLLRSSSQFSTSPVDLQTCPICSKLLTEKSSWSSQKMIASNDLAVVSVLICGHVYHAECLESMTPETKKYDPACPVCTFGEKQILKLSEKALKAEMNLRARNKKSKNRIVDSEFDDDFVFDHFKDGGRQGQGLRMYSSSSGRRSFGKHFLRRHFSFGSKSSKSIRDSFGRNLANNKRLLVCWEVPLSTLQPQINN 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0706 449 MobiDBLite consensus disorder prediction 59 88 - -
Lal1g0706 449 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 253 333 IPR013083 -
Lal1g0706 449 PANTHER EXPRESSED PROTEIN 1 421 - -
Lal1g0706 449 MobiDBLite consensus disorder prediction 130 188 - -
Lal1g0706 449 PANTHER BNAA09G43140D PROTEIN 1 421 - -
Lal1g0706 449 ProSiteProfiles Zinc finger RING-type profile. 273 332 IPR001841 -
Lal1g0706 449 SUPERFAMILY RING/U-box 272 333 - -
Lal1g0706 449 SMART ring_2 273 331 IPR001841 -
Lal1g0706 449 MobiDBLite consensus disorder prediction 125 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0706 Lal-Chr1 4715413 4720578 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0706 1 4715413 4720578 Lal2g0769 2 4935400 4941389 LSH
Lal1g0706 1 4715413 4720578 Lal9g0674 9 4640118 4646138 LSH