Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lal1g0691 | ATGAACATGGCATCAAATAGTCCATTATTTGACGATATACGGAGCCACTCTGATATTGATCCCCCTCAAAATGAAGAGTTGACAGATGTTAGTGAATTAGTGAATGATCCTACACAAACTGCTCATAAACCTAATGGGATTGTTTCAAGCAGTGTCCGTGAGCTCTTAGAGTGCCCTGTATGCTTGAATGCTATGTACCCTCCAATCCACCAGTGTTCAAATGGTCACACTATATGCTCAAGTTGCAAACCCAGGGTCCACAATCGGTGCCCGACTTGTAGGCATGAGCTTGGCAATATCAGATGTCTGGCACTGGAGAAGGTGGCTGCTTCTTTGGAACTTCCCTGTAAATATCAAGGTTTTGGGTGCATTGGTATATATCCCTATTACAGCAAGCTAAAACATGAATCTCAATGTGTATATAGACCCTATAACTGTCCATATGCTGGTTCAGAATGCTCTGTTATGGGTGATATACCCTACCTGGCGACCCATCTGAAAGATGACCACAAAGTGGACATGCACAGTGGTAGTACTTTTAACCATCGCTATGTCAAATCAAATCCACAAGAAGTTGAAAATGCCACATGGATGCTGACGGTTTTCAGCTGCTTTGGTCAGTATTTTTGTCTACATTTCGAAGCTTTTCAGTTAGGTGCAGCTCCTGTCTACATAGCCTTTTTACGGTTTATGGGCGATGACAATGAGGCAAAGAATTATAGCTACAGTCTAGAGGTAGGTGGAAATGGGAGGAAAATGGTTTGGCAGGGGGTGCCGAGAAGCATTAGGGACAGCCACTGCAAGGTTCGTGACAGTTATGACGGTCTCATCATTCAAAGGAATATGGCTCTCTTCTTTTCAGGTGGTGACCAGAAGGAGTTAAAGTTAAGAGTTACTGGTAGGATTTGGAAAGAACAGTGA | 921 | 0.4332 | MNMASNSPLFDDIRSHSDIDPPQNEELTDVSELVNDPTQTAHKPNGIVSSSVRELLECPVCLNAMYPPIHQCSNGHTICSSCKPRVHNRCPTCRHELGNIRCLALEKVAASLELPCKYQGFGCIGIYPYYSKLKHESQCVYRPYNCPYAGSECSVMGDIPYLATHLKDDHKVDMHSGSTFNHRYVKSNPQEVENATWMLTVFSCFGQYFCLHFEAFQLGAAPVYIAFLRFMGDDNEAKNYSYSLEVGGNGRKMVWQGVPRSIRDSHCKVRDSYDGLIIQRNMALFFSGGDQKELKLRVTGRIWKEQ | 306 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lal1g0691 | 306 | CDD | RING-HC_SIAHs | 56 | 94 | - | - | |
| Lal1g0691 | 306 | ProSiteProfiles | Zinc finger RING-type profile. | 58 | 94 | IPR001841 | - | |
| Lal1g0691 | 306 | Pfam | Seven in absentia protein family | 100 | 299 | IPR018121 | GO:0005737|GO:0006511|GO:0007275 | |
| Lal1g0691 | 306 | PANTHER | E3 UBIQUITIN PROTEIN LIGASE SIAH | 11 | 306 | - | - | |
| Lal1g0691 | 306 | SUPERFAMILY | RING/U-box | 50 | 98 | - | - | |
| Lal1g0691 | 306 | CDD | Sina | 172 | 300 | - | - | |
| Lal1g0691 | 306 | MobiDBLite | consensus disorder prediction | 1 | 24 | - | - | |
| Lal1g0691 | 306 | Gene3D | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 167 | 299 | IPR008974 | GO:0005515 | |
| Lal1g0691 | 306 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE DIS1 | 11 | 306 | - | - | |
| Lal1g0691 | 306 | SUPERFAMILY | TRAF domain-like | 111 | 303 | - | - | |
| Lal1g0691 | 306 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 14 | 110 | IPR013083 | - | |
| Lal1g0691 | 306 | ProSiteProfiles | Zinc finger SIAH-type profile. | 111 | 171 | IPR013010 | GO:0008270 | |
| Lal1g0691 | 306 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 111 | 166 | IPR013083 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lal1g0691 | Lal-Chr1 | 4551213 | 4555286 | Dispersed/Wgd |
Event-related genes