Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0689 ATGATGTACGGTGATCCTCATAACCACCACCACCATCAACAACAACAACAACAGCAGCAGCAGCCGCCGCCGCCACAGCATTTTCAGCATCAACAGCAGCCAGGTCCAGAATTTCACCGTGGACCACCGCCACCGCAGATGATGCGCCAACCTTCTGCTTCCTCCACTAACATACCTCCAGAGTTTCACCACCCTGCTCCTGGTGGGCCCCATCCTCCTCATTACGATGTTCATGGTGATATCCATGGTGCAAAAAGAATGAGAAAGCTTGCTCAAAGGAAGGCGGTTGATTATACGAGCACAGTTGTGCGTTATATGCAGATTCGTATGTTGCAACGAGATTCAAGGGACAGGACAGTTCTTCAACCTACCCCAGCGGCAGCAATTGATATGTTACCAGCAGTTGGCTATTCAGACAATCCATCTACAAGCTTTGCTGCTAAATTTGTTCATACATCTATAAATAAAAATCGATGCCCTATTAATCGTGTTCTTTGGACTCCAACGGGACGACGCCTTATTACTGGCTCACAGACTGGGGAATTTACTCTCTGGAATGGACAGTCTTTTAATTTTGAAATGATTCTTCAGGCACATGACCAAGCAATTAGATCCATGGTCTGGAGTCACAATGACAACTGGATGGTCTCTGGTGATGATGGAGGCGCAATAAAGTATTGGCAGAACAACATGAACAATGTTAAAGCTAACAAATCTGCTCATAAAGAATCAGTCCGTGACTTAAGGACAGATTTGAAGTTCTGCTCATGCTCTGATGATACTACTGTTAAAGTTTGGGATTTTGCACGCTGTCAAGAAGAGTCTTCATTAACTGGTAATGCAGGCCATGGTTGGGATGTGAAGAGTGTTGACTGGCATCCTACAAAATCCCTATTAGTATCAGGTGGGAAGGACAATCTTGTGAAACTTTGGGATGCTAAATCGGGAAAAGAACTTTGCTCATTTCATGGACATAAAAATACTGTGCTCTGTGTCAAGTGGAATCAAAATGGTAACTGGGTGTTAACAGCTTCAAAGGATCAAATAGTAAAGCTTTATGACATAAGGGCTATGAAGGAGCTTGAATCATTCCGTGGACATCAGAAGGATGTTACTGCTTTGGCTTGGCATCCATTCCATGAAGAATACTTTGTCAGTGGGAGTTATGACGGTTCCATATTCCATTGGCTTGTCGGGCATGAAACTCCGCAAATTGAAGTTACCAGTGCTCATGATAATAATGTGTGGGACCTTGCATGGCATCCTATTGGATACCTTCTCTGCAGTGGTAGCAGTGATCACACAACGAAGTTTTGGTGCAGAAATAGGCCAGGAGACACTGTTCGTGATAGATTTAACAATGGCATGCAAGGATATGCTGACCAAAACCCTGTTCCTGGTCGTGTGGGTGGTAACTTTGCGATGCCTGAAGGTCCAACAACTCCAGGACCATTTCCCCCAGGGTTGACTCGAAATGAAGGTACCATTCCAGGTGTTGGAGTTGCGATGCCCATACTTGATGTGCCTCATGGGGAGCAGATACAGCCCCATCCTGCTTCAATGGGTGCTCCTCCTCTTCCACCAGGTCCACATCCCTCTCTTCTTAATGCCAATCAACAGAGACCATACCAGCAGAATCCTCAGCAGACCCCACAACATCAACACCAGGGACTACCACAACAAATGGGTCCTTTGCCTATGCCCCCAAATATGCCACAGCTACAGCACCCTTCCCAGTCATCCATGGTCCCTTATGCACATTTGCCTCGCCCTCCACCCCAAATGCCACTTGGAATGCCAGGTCCTACGTCACACCCAGTGCCAGGTCCAATGGGTATGCAAGGTGGGATGAATCAGATGGGTCCTTCACCTCCAATGTCACAAGGTCATTATGGGGGCATGAATCAAATGCATTCAGGATCCTTGCCCCCAGGTGGAGGGCCACCTGTTGGAGGTTTTCCAGGCAACATGCCTAATATGCAAGGGCCACCAAATACCGGCTATCCTCAAGGATCATTCAACCGACCTCAAAGTGGACAAATGCCTTTGATGCAAGGGTATAATCCTTACCAGTCTGGAAATCAATCTGGGATGCCTCCAAACGCACAATCAGGGCCACCACACTCTCAAATGCCTCAATAG 2142 0.4692 MMYGDPHNHHHHQQQQQQQQQPPPPQHFQHQQQPGPEFHRGPPPPQMMRQPSASSTNIPPEFHHPAPGGPHPPHYDVHGDIHGAKRMRKLAQRKAVDYTSTVVRYMQIRMLQRDSRDRTVLQPTPAAAIDMLPAVGYSDNPSTSFAAKFVHTSINKNRCPINRVLWTPTGRRLITGSQTGEFTLWNGQSFNFEMILQAHDQAIRSMVWSHNDNWMVSGDDGGAIKYWQNNMNNVKANKSAHKESVRDLRTDLKFCSCSDDTTVKVWDFARCQEESSLTGNAGHGWDVKSVDWHPTKSLLVSGGKDNLVKLWDAKSGKELCSFHGHKNTVLCVKWNQNGNWVLTASKDQIVKLYDIRAMKELESFRGHQKDVTALAWHPFHEEYFVSGSYDGSIFHWLVGHETPQIEVTSAHDNNVWDLAWHPIGYLLCSGSSDHTTKFWCRNRPGDTVRDRFNNGMQGYADQNPVPGRVGGNFAMPEGPTTPGPFPPGLTRNEGTIPGVGVAMPILDVPHGEQIQPHPASMGAPPLPPGPHPSLLNANQQRPYQQNPQQTPQHQHQGLPQQMGPLPMPPNMPQLQHPSQSSMVPYAHLPRPPPQMPLGMPGPTSHPVPGPMGMQGGMNQMGPSPPMSQGHYGGMNQMHSGSLPPGGGPPVGGFPGNMPNMQGPPNTGYPQGSFNRPQSGQMPLMQGYNPYQSGNQSGMPPNAQSGPPHSQMPQ 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0689 713 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 196 228 - -
Lal1g0689 713 SMART WD40_4 315 354 IPR001680 GO:0005515
Lal1g0689 713 SMART WD40_4 270 312 IPR001680 GO:0005515
Lal1g0689 713 SMART WD40_4 231 267 IPR001680 GO:0005515
Lal1g0689 713 SMART WD40_4 142 186 IPR001680 GO:0005515
Lal1g0689 713 SMART WD40_4 357 397 IPR001680 GO:0005515
Lal1g0689 713 SMART WD40_4 401 440 IPR001680 GO:0005515
Lal1g0689 713 SMART WD40_4 189 228 IPR001680 GO:0005515
Lal1g0689 713 ProSiteProfiles Trp-Asp (WD) repeats profile. 280 321 IPR001680 GO:0005515
Lal1g0689 713 ProSiteProfiles Trp-Asp (WD) repeats profile. 196 228 IPR001680 GO:0005515
Lal1g0689 713 CDD WD40 158 439 - -
Lal1g0689 713 SUPERFAMILY WD40 repeat-like 150 439 IPR036322 GO:0005515
Lal1g0689 713 MobiDBLite consensus disorder prediction 659 713 - -
Lal1g0689 713 PRINTS G protein beta WD-40 repeat signature 254 268 IPR020472 -
Lal1g0689 713 PRINTS G protein beta WD-40 repeat signature 299 313 IPR020472 -
Lal1g0689 713 PRINTS G protein beta WD-40 repeat signature 427 441 IPR020472 -
Lal1g0689 713 Gene3D - 129 360 IPR015943 GO:0005515
Lal1g0689 713 MobiDBLite consensus disorder prediction 586 607 - -
Lal1g0689 713 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 280 317 - -
Lal1g0689 713 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 408 439 - -
Lal1g0689 713 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 322 356 - -
Lal1g0689 713 Gene3D - 361 450 IPR015943 GO:0005515
Lal1g0689 713 MobiDBLite consensus disorder prediction 1 80 - -
Lal1g0689 713 PANTHER WD40 REPEAT PROTEIN 70 709 IPR045245 GO:0031124
Lal1g0689 713 MobiDBLite consensus disorder prediction 533 559 - -
Lal1g0689 713 ProSiteProfiles Trp-Asp (WD) repeats profile. 364 396 IPR001680 GO:0005515
Lal1g0689 713 ProSiteProfiles Trp-Asp (WD) repeats profile. 408 439 IPR001680 GO:0005515
Lal1g0689 713 ProSiteProfiles Trp-Asp (WD) repeats profile. 322 363 IPR001680 GO:0005515
Lal1g0689 713 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 364 396 - -
Lal1g0689 713 MobiDBLite consensus disorder prediction 474 713 - -
Lal1g0689 713 ProSitePatterns Trp-Asp (WD) repeats signature. 299 313 IPR019775 -
Lal1g0689 713 ProSiteProfiles Trp-Asp (WD) repeats profile. 154 186 IPR001680 GO:0005515
Lal1g0689 713 MobiDBLite consensus disorder prediction 620 635 - -
Lal1g0689 713 Pfam WD domain, G-beta repeat 277 312 IPR001680 GO:0005515
Lal1g0689 713 Pfam WD domain, G-beta repeat 360 396 IPR001680 GO:0005515
Lal1g0689 713 Pfam WD domain, G-beta repeat 194 227 IPR001680 GO:0005515
Lal1g0689 713 Pfam WD domain, G-beta repeat 316 354 IPR001680 GO:0005515
Lal1g0689 713 Pfam WD domain, G-beta repeat 408 439 IPR001680 GO:0005515
Lal1g0689 713 Pfam WD domain, G-beta repeat 239 267 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0689 Lal-Chr1 4521431 4530801 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0689 1 4521431 4530801 Lal9g0667 9 4587204 4596648 LSH