Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0688 ATGGCTATAGCTGCAGATTCTCAGTTCCATGTTTTGGCTGTCGATGACAGCCGAATCGACCGAATGCTGATCGAGAGTCTCCTTAAAACATCTTCATTTCATGTTACTACAGTGGATTCTGCCACTAAGGCTTTGAAAATTCTTGGTTTGGTTGAAGATGATTTGAGGAATTTTGATACTTCTGTTGTTTCAAAATTTCATCAGGATGTTGAAGTAAATATGATCATAACAGATTACTGCATGCCAGGAATGACTGGCTATGATCTTCTGAGAAAAATCAAGGAATCTAAGTCTCTTAAAGACATACCAGTTGTGATTATGTCCTCAGAGAATGTTCCATCAAGGATCAACAGATGCTTGGAAGAGGGTGCTGAAGAATTCTTTCTGAAACCAGTTCAACAATCAGATGTGAACAAACTCAAGCCTCATTTGTTGAAATCAAGAGTTAAGGAAGAACAAGACCAACTCATCAACAGCAAAAGGAAGGGCATGGAACAAAGCTACTCACCAAATAAAAATAGACAAAAAATGTAG 534 0.3801 MAIAADSQFHVLAVDDSRIDRMLIESLLKTSSFHVTTVDSATKALKILGLVEDDLRNFDTSVVSKFHQDVEVNMIITDYCMPGMTGYDLLRKIKESKSLKDIPVVIMSSENVPSRINRCLEEGAEEFFLKPVQQSDVNKLKPHLLKSRVKEEQDQLINSKRKGMEQSYSPNKNRQKM 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0688 177 MobiDBLite consensus disorder prediction 160 177 - -
Lal1g0688 177 Pfam Response regulator receiver domain 11 137 IPR001789 GO:0000160
Lal1g0688 177 MobiDBLite consensus disorder prediction 150 177 - -
Lal1g0688 177 PANTHER TWO-COMPONENT RESPONSE REGULATOR 3 175 IPR045279 GO:0009736
Lal1g0688 177 SMART REC_2 9 144 IPR001789 GO:0000160
Lal1g0688 177 PANTHER RESPONSE REGULATOR ARR8, PUTATIVE-RELATED 3 175 - -
Lal1g0688 177 SUPERFAMILY CheY-like 8 151 IPR011006 -
Lal1g0688 177 CDD REC_typeA_ARR 11 140 - -
Lal1g0688 177 ProSiteProfiles Response regulatory domain profile. 10 145 IPR001789 GO:0000160
Lal1g0688 177 Gene3D - 10 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0688 Lal-Chr1 4518268 4520407 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lal1g0688 Response_reg 6.5e-20 CL0304
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0688 1 4518268 4520407 Lal2g0756 2 4853836 4857293 LSH
Lal1g0688 1 4518268 4520407 Lal9g0666 9 4582458 4586237 LSH
Lal1g0688 1 4518268 4520407 Lal20g0658 20 6121626 6125354 PCT
Lal1g0688 1 4518268 4520407 Lal1g1503 1 17122701 17126444 PCT