Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0682 ATGAGGGAAATCAAAGTGCAAAAGCTTGTACTCAATATCTCTGTTGGTGAAAGTGGAGATCGTCTCACAAGAGCAGCAAAGGTATTGGAACAGCTCAGTGGCCAAACCCCTGTTTTTTCTAAAGCAAGGTACACTGTTCGATCCTTCGGAATTAGAAGAAATGAAAAGATTGCATGCTATGTTACTGTTAGAGGTGACAAGGCAATGCAACTTTTGGAGAGTGGCTTGAAGGTGAAGGAATATGAACTTCTGCGAAGAAACTTCAGTGATACTGGATGTTTCGGCTTTGGTATTCAGGAGCATATCGATTTGGGAATCAAGTATGATCCTTCAACTGGTATTTATGGAATGGACTTCTATGTTGTTCTGGAGCGTCCTGGTTATCGTGTTGGACGTCGTCGGCGCTGCAAGGCTCGTGTTGGGATCCAGCATCGTGTTACAAAGGATGATGCTATGAAGTGGTTCCAGGTGAAATATGAAGGTGTGATCCTGAACAAGTCGCAGAATATCTCTTAG 516 0.4341 MREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFYVVLERPGYRVGRRRRCKARVGIQHRVTKDDAMKWFQVKYEGVILNKSQNIS 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0682 171 Pfam Ribosomal protein L5 1 52 IPR031310 -
Lal1g0682 171 PIRSF RPL5p_RPL5a_RPL11e_RPL5o 1 162 IPR002132 GO:0003735|GO:0005840|GO:0006412
Lal1g0682 171 PANTHER 60S RIBOSOMAL PROTEIN L11-RELATED 1 170 IPR002132 GO:0003735|GO:0005840|GO:0006412
Lal1g0682 171 SUPERFAMILY RL5-like 1 163 IPR022803 -
Lal1g0682 171 Pfam ribosomal L5P family C-terminus 56 154 IPR031309 -
Lal1g0682 171 PANTHER 60S RIBOSOMAL PROTEIN L11-1 1 170 - -
Lal1g0682 171 Gene3D - 1 167 IPR022803 -
Lal1g0682 171 ProSitePatterns Ribosomal protein L5 signature. 29 45 IPR020929 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0682 Lal-Chr1 4463335 4465359 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g0682 1 171 Cytoplasmic Ribosomal Protein Gene Family AT2G42740 97.076 4.47e-124 345