Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0676 ATGACACTATTGTGGTTTAGCGAAGTGCATCTTTTGGGCCGCCATGATGCTTTTACCAGTGTATCATGGGTTGAGCGGCCCACTTTAGCAGCCACTATAATGGGTGGAGCGGCAAATAGCGTCCGTTGCTTCTTCTGTCGACTGCTTCGCTATCTTGGTTTGACTACTGAGATTAATACCGTTCTAACTGTGGCTGTAATTTATACTCTTGCCTTGTCTGATCTGCTGATCCCATCTAGTGGGATTAAGGCTTGGTTGTTGGTTGGTCTGATCTGGTGTAGGCATGGAATTCAGCTTACTCTGTTTTCAAGTTGGTATTTGAGCAGGGGCATTGCTAAAGAGCTTCGAGATAATGAGTATTCTTCTCCCATAACTAGTATTTGTTGGTCGAAGTGTGGTAATCGAATTCTTGCATCTGCTGCTGACAAGTCATTATCTTTGTGGGATGTTGTGAGTGGTAATAGGATAACACGAATAGTATTGCAACAAACCCCTCTACAAGTTCGTCTTCATCCAGGTTCCTCACCATCTCTCTGCTTGGCATGCCCTCTCTCATGTGCTCCGATAATTGTTGACTTGAATACGGGAAGCACAACCTTGCTTAAAGTTTCTGTCTCAGAAATATCCAATGGACCAACTCCTGCATCACGCAACAAGTGCTTTGATGGAACTACCTCCTTCACACCCACGGCTGCGTGTTTTAGTAAGTATGGCAAGCTGGTTTATCTGGGAAATTCAAAAGGGGAAATTCTTGTAATTGATCATAAAGACGGTGAAGTACGTGCTATGGTTCCTATCTCTGGTGGATCTTTAGTGAAGAACATTGTGTTCAGCAGGAACGGACAGTATCTGCTAACAAACTCAAATGACCGGGTAATCAGGATCTATGAAAATCTTCTGCCCTTGAAAGATGAAGTTAGAGCCCTTGATGACCTGAATGAGAGGCTCAGTGATCTAAGTGGTGTTGAGAAGCTAAAAGGTGTAGGATCAAAATGTTTAACTTTATTCCGAGAGTTCCAAGATGCGATCACAAAGGTGCACTGGAAAGTGCCCTGCTTCAGTGGTGATGGCGAGTGGGTTGTTGGTGGTTCTGCTAGCAAAGGAGAGCACAAGATTTACGTATGGGATAGGGCCGGGCATCTTGTGAAAATCCTTGAAGGACCTAAGGAAGCCCTCATTGATTTGGCATGGCATCCTGTACGTCCCATTGTTGTATCCGTTTCTTTGAATGGCATAGTTTATATCTGGGCTAAAGATTACACTGAGAGCTGGAGTGCATTTGCTCCTGATTTCAAAGAGCTTGAGGAAAATGAAGAGTACGTGGAACGAGAAGATGAGTTTGATTTGAATCCCGACACTGAGAAGGTAAAAGGATCTGATGCAAACGAAGATGAGGAGGTTGACATTTTAGCAGTGGAGAAAGATCCAGCTTTCAGCGACTCCGATATGTCTCAAGAAGAGCTATGTTTCCTGCCAGCAACTCCAATTCGCGATGTCGCTGAACAGCAAGAAGACAAGCTTATAGAAAGTTCTTCAAAGATAGTGGACAGCAATAACTCCGGATCTCCACTTTCAGTAGAGGCTGGACCAAATGGGCATACGTCGAACAATGCCTCAAGTCCAGTTGAAGATGGTGCTGTGGGAACGCGCATTAAAAGAAAGCGGAAACCTTCAGAGAAGGTGTTGGATTTGCAGGATGAAAAAGCCAAGAAGCCATCAAAATCTAGCAAAGCATCAAAATCTAAAAGTAAATCTCTGATTGATCAGGATAACAATGGTAATGGTTTTCACAGTGATGAGATTTCTGATTAA 1812 0.4371 MTLLWFSEVHLLGRHDAFTSVSWVERPTLAATIMGGAANSVRCFFCRLLRYLGLTTEINTVLTVAVIYTLALSDLLIPSSGIKAWLLVGLIWCRHGIQLTLFSSWYLSRGIAKELRDNEYSSPITSICWSKCGNRILASAADKSLSLWDVVSGNRITRIVLQQTPLQVRLHPGSSPSLCLACPLSCAPIIVDLNTGSTTLLKVSVSEISNGPTPASRNKCFDGTTSFTPTAACFSKYGKLVYLGNSKGEILVIDHKDGEVRAMVPISGGSLVKNIVFSRNGQYLLTNSNDRVIRIYENLLPLKDEVRALDDLNERLSDLSGVEKLKGVGSKCLTLFREFQDAITKVHWKVPCFSGDGEWVVGGSASKGEHKIYVWDRAGHLVKILEGPKEALIDLAWHPVRPIVVSVSLNGIVYIWAKDYTESWSAFAPDFKELEENEEYVEREDEFDLNPDTEKVKGSDANEDEEVDILAVEKDPAFSDSDMSQEELCFLPATPIRDVAEQQEDKLIESSSKIVDSNNSGSPLSVEAGPNGHTSNNASSPVEDGAVGTRIKRKRKPSEKVLDLQDEKAKKPSKSSKASKSKSKSLIDQDNNGNGFHSDEISD 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0676 603 MobiDBLite consensus disorder prediction 503 603 - -
Lal1g0676 603 SUPERFAMILY Putative isomerase YbhE 119 421 - -
Lal1g0676 603 ProSiteProfiles Trp-Asp (WD) repeats profile. 117 158 IPR001680 GO:0005515
Lal1g0676 603 MobiDBLite consensus disorder prediction 547 574 - -
Lal1g0676 603 SMART WD40_4 214 254 IPR001680 GO:0005515
Lal1g0676 603 SMART WD40_4 257 297 IPR001680 GO:0005515
Lal1g0676 603 SMART WD40_4 329 376 IPR001680 GO:0005515
Lal1g0676 603 SMART WD40_4 108 149 IPR001680 GO:0005515
Lal1g0676 603 SMART WD40_4 378 417 IPR001680 GO:0005515
Lal1g0676 603 MobiDBLite consensus disorder prediction 448 464 - -
Lal1g0676 603 Gene3D - 311 450 IPR015943 GO:0005515
Lal1g0676 603 MobiDBLite consensus disorder prediction 512 543 - -
Lal1g0676 603 MobiDBLite consensus disorder prediction 442 464 - -
Lal1g0676 603 MobiDBLite consensus disorder prediction 579 603 - -
Lal1g0676 603 Pfam WD domain, G-beta repeat 122 149 IPR001680 GO:0005515
Lal1g0676 603 ProSitePatterns Trp-Asp (WD) repeats signature. 136 150 IPR019775 -
Lal1g0676 603 Gene3D - 93 310 IPR015943 GO:0005515
Lal1g0676 603 PANTHER RETINOBLASTOMA-BINDING PROTEIN 5 108 584 IPR037850 GO:0048188
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0676 Lal-Chr1 4410381 4414130 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0676 1 4410381 4414130 Lal2g0722 2 4495951 4500211 LSH